Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_L13
(1268 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 35 0.14
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.7
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 5.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 7.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.0
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 34.7 bits (76), Expect = 0.14
Identities = 23/74 (31%), Positives = 27/74 (36%)
Frame = +1
Query: 922 PXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXXKTXXK 1101
P PPPPR + GG+ P PP P P P T PP +T
Sbjct: 123 PPPPPPR---KSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMT--PPSPQRRPPRT-PP 176
Query: 1102 TPRXXXXPRAPKPP 1143
+P PR P P
Sbjct: 177 SPEPRNPPRTPPSP 190
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = +1
Query: 928 PPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXXKTXXKTP 1107
PPPP G GG P PP L P P PP + P
Sbjct: 713 PPPPPGLPPITGG-----PPPPPPPGGLPPITGGPPPPPPPGGLPP---ISGGPPPPPPP 764
Query: 1108 RXXXXPRAPKPPXWGVXXXPXPP 1176
P P PP G P PP
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 5.3
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 604 PPPXLFFLXGXPPXF*KKKXXXPPXXXP*PPPXPGG 711
PPP L + G PP P P PPP PGG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = +1
Query: 928 PPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXXKTXXKTP 1107
PPPP G GG P PP L P P PP + P
Sbjct: 713 PPPPPGLPPITGG-----PPPPPPPGGLPPITGGPPPPPPPGGLPP---ISGGPPPPPPP 764
Query: 1108 RXXXXPRAPKPPXWGVXXXPXPP 1176
P P PP G P PP
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 5.3
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 604 PPPXLFFLXGXPPXF*KKKXXXPPXXXP*PPPXPGG 711
PPP L + G PP P P PPP PGG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/83 (28%), Positives = 25/83 (30%)
Frame = +1
Query: 928 PPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXXKTXXKTP 1107
PPPP G GG P PP L P P PP + P
Sbjct: 296 PPPPPGLPPITGG-----PPPPPPPGGLPPITGGPPPPPPPGGLPP---ISGGPPPPPPP 347
Query: 1108 RXXXXPRAPKPPXWGVXXXPXPP 1176
P P PP G P PP
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.5 bits (63), Expect = 5.3
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 604 PPPXLFFLXGXPPXF*KKKXXXPPXXXP*PPPXPGG 711
PPP L + G PP P P PPP PGG
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 1046 GXXXGRAXPPPXRVGXLGGXXGAAXAPPPXFCS 948
G G A PPP GG G APPP + +
Sbjct: 24 GGGCGCAPPPPPPACGCGGGGGGYAAPPPAYAA 56
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +1
Query: 922 PXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXP 1047
P PPPP P PP PT+ +PL P
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVP 1377
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 7.0
Identities = 23/90 (25%), Positives = 26/90 (28%)
Frame = +1
Query: 907 PXXXXPXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXX 1086
P P PPPP+G G G +P PP + P P PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSG---SPPPPPAAGSPPPPRTGSPPPPPTGSPPP-----PP 284
Query: 1087 KTXXKTPRXXXXPRAPKPPXWGVXXXPXPP 1176
P P P PP PP
Sbjct: 285 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 7.0
Identities = 23/90 (25%), Positives = 26/90 (28%)
Frame = +1
Query: 907 PXXXXPXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXX 1086
P P PPPP+G G G +P PP + P P PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSG---SPPPPPAAGSPPPPRTGSPPPPPTGSPPP-----PP 305
Query: 1087 KTXXKTPRXXXXPRAPKPPXWGVXXXPXPP 1176
P P P PP PP
Sbjct: 306 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 7.0
Identities = 23/90 (25%), Positives = 26/90 (28%)
Frame = +1
Query: 907 PXXXXPXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXX 1086
P P PPPP+G G G +P PP + P P PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSG---SPPPPPAAGSPPPPRTGSPPPPPTGSPPP-----PP 290
Query: 1087 KTXXKTPRXXXXPRAPKPPXWGVXXXPXPP 1176
P P P PP PP
Sbjct: 291 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,445,943
Number of Sequences: 27780
Number of extensions: 271162
Number of successful extensions: 763
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3537281262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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