Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_L12
(911 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.005
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPAC1250.07 |sfc7||TFIIIC subunit Sfc7|Schizosaccharomyces pombe... 36 0.008
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.40
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.52
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 29 0.92
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 2.1
SPMIT.04 |cox3||cytochrome c oxidase 3|Schizosaccharomyces pombe... 27 3.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.9
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 4.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.5
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 26 6.5
SPCC11E10.07c |||translation initiation factor eIF2B alpha subun... 26 6.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 8.5
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 26 8.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 8.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.005
Identities = 31/120 (25%), Positives = 31/120 (25%), Gaps = 2/120 (1%)
Frame = +3
Query: 558 PXPPPXXXXXXXXPPXXXXXXXPGAXXXPX*GGXXXPPPPXXXXXGGXGPP-PPPNXXGX 734
P PPP P P PPP PP PPP G
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 735 PXPFLGKXGXXLXPXXAXPPPPPXXPXXXXP-XXXSFFXSPXXGGXGXPPXXPPXXXTPP 911
P L G P PP P P S S G PP P PP
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +1
Query: 790 PHXRPXPPXXXP-PXGXPFFXPXXXGAXAXXPXPPPXPPPP 909
P P P P P G P P A A P P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = +3
Query: 666 PP--PPXXXXXGGXGPPPPPNXXGXPXPFLGKXGXXLXPXXAXPPPPPXXPXXXXP 827
PP PP PP PP+ P G P A PPP P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 787 PPHXRPXPPXXXPPXGXPFFXPXXXGAXAXXPXPPPXPPPP 909
PP P P PP P A P P PP P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 705 PPPPPNXXGXPXPFLGKXGXXLXPXXAXPPPPP 803
PPPPP+ P +G + PPPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGS----SNSSLPPPPP 341
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +3
Query: 558 PXPPPXXXXXXXXPPXXXXXXXPGAXXXPX*GGXXXPPPPXXXXXGGXGPPPPP 719
P PPP P P P GG PPPP G PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPA----PIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +1
Query: 766 PXXLXXXPPHXRPXP-PXXXPPXGXPFFXPXXXGAXAXXPXPPPXPPP 906
P + P P P P P G P P G P PPP PPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +3
Query: 666 PPPPXXXXXGGXGPPPPPNXXGXPXPFLGKXGXXLXP---XXAXPPPPPXXP 812
PPPP P P P P P +G P A PPPPP P
Sbjct: 733 PPPPPAVIV--PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +2
Query: 566 PPXPXXXXXXPPXXXXPXXPRGXGVXXLGGXXXXPPXXXXXXXGVXAPPPP*P 724
PP P P P P +GG PP G PPPP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAP---IMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 802 PXPPXXXPPXGXPFFXPXXXGAXAXXPXPPPXPPP 906
P PP P P P A PPP PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC1250.07 |sfc7||TFIIIC subunit Sfc7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 120
Score = 35.9 bits (79), Expect = 0.008
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +2
Query: 62 MENDALDDCEEEILVYLEFKDSVNIEKYRNIHILGIDSKNPIVQMDDTFYIGKYDNPFGT 241
+E D +DD E +V+ S++ + + ILGID +PIV++ F+ G + P GT
Sbjct: 8 LETD-VDDVEN--IVFQFQNSSLDFQSSDDFSILGIDQPHPIVRIGGMFFRGTWHQPIGT 64
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.3 bits (65), Expect = 0.40
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 4/83 (4%)
Frame = +3
Query: 564 PPPXXXXXXXXPPXXXXXXXPGAXXXPX*----GGXXXPPPPXXXXXGGXGPPPPPNXXG 731
PPP P PG P G PPPP G PPPP +
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH-- 266
Query: 732 XPXPFLGKXGXXLXPXXAXPPPP 800
P + P PPPP
Sbjct: 267 EPGEHMPPPPMHHEPGEHMPPPP 289
Score = 30.3 bits (65), Expect = 0.40
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 4/83 (4%)
Frame = +3
Query: 564 PPPXXXXXXXXPPXXXXXXXPGAXXXPX*----GGXXXPPPPXXXXXGGXGPPPPPNXXG 731
PPP P PG P G PPPP G PPPP +
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH-- 305
Query: 732 XPXPFLGKXGXXLXPXXAXPPPP 800
P + P PPPP
Sbjct: 306 EPGEHMPPPPMHHEPGEHMPPPP 328
Score = 29.1 bits (62), Expect = 0.92
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = +3
Query: 654 GXXXPPPPXXXXXGGXGPPPPPNXXGXPXPFLGKXGXXLXPXXAXPPPP 800
G PPPP G PPPP + P + P PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHH--EPGEHMPPPPMHHEPGEHMPPPP 250
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 4/55 (7%)
Frame = +3
Query: 564 PPPXXXXXXXXPPXXXXXXXPGAXXXPX*----GGXXXPPPPXXXXXGGXGPPPP 716
PPP P PG P G PPPP G PPPP
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.52
Identities = 21/83 (25%), Positives = 22/83 (26%), Gaps = 1/83 (1%)
Frame = +3
Query: 666 PPPPXXXXXGGXGPPPPPNXXGXPXPFLGKXGXXLXPXXAXPPPPPXXPXXXXP-XXXSF 842
PP P PPP P G P + PP P P S
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 843 FXSPXXGGXGXPPXXPPXXXTPP 911
P G PP P PP
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +3
Query: 672 PPXXXXXGGXGPPPPPNXXGXPXPFLGKXGXXLXPXXAXPPPPPXXPXXXXPXXXSFFXS 851
PP P P P+ P P P A PP P P S
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP-SVAAP 1150
Query: 852 PXXGGXGXPPXXPPXXXTPP 911
P G PP P PP
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPP 1170
Score = 27.9 bits (59), Expect = 2.1
Identities = 27/117 (23%), Positives = 28/117 (23%)
Frame = +3
Query: 558 PXPPPXXXXXXXXPPXXXXXXXPGAXXXPX*GGXXXPPPPXXXXXGGXGPPPPPNXXGXP 737
P P P P P P PP G P P P+ P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP-PVPKPSVAAPP 1151
Query: 738 XPFLGKXGXXLXPXXAXPPPPPXXPXXXXPXXXSFFXSPXXGGXGXPPXXPPXXXTP 908
P P A P P P P S G PP PP P
Sbjct: 1152 VP---------APSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 787 PPHXRPX---PPXXXPPXGXPFFXPXXXGAXAXXPXPPPXPPPP 909
PP +P PP P G P P A P PPP PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIP---PVPKPAAGVPPVPPPSEAPP 1199
Score = 26.2 bits (55), Expect = 6.5
Identities = 29/121 (23%), Positives = 32/121 (26%), Gaps = 8/121 (6%)
Frame = +3
Query: 540 IXXPXXPXP---PPXXXXXXXXPPXXXXXXXPGAXXXPX*GGXXXPPP----PXXXXXGG 698
+ P P P PP PP P G PPP P G
Sbjct: 1147 VAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Query: 699 XGPPPPPNX-XGXPXPFLGKXGXXLXPXXAXPPPPPXXPXXXXPXXXSFFXSPXXGGXGX 875
P PPP+ P P G + A P P P S SP
Sbjct: 1207 VPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPS 1266
Query: 876 P 878
P
Sbjct: 1267 P 1267
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 29.1 bits (62), Expect = 0.92
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 77 LDDCEEEILVYLEFKDSVNIEKYRNIHILGIDSKNP-IVQMDDTFYIGKY 223
L+ +EI Y+ +DSV +EK NI++ + K P V++ TF +Y
Sbjct: 54 LEAAGDEISQYITPEDSVLLEKLENIYVERFNEKEPRDVRISLTFQPNEY 103
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 92 EEILVYLEFKDSVNIEKYRNIHILG--IDSKNPIVQMDDTFYIGKYDNPFGTYLFFEE 259
E++ V+ E D + +N +LG +D +N +VQ D++ I +N L F+E
Sbjct: 776 EKVSVFKEMSDIALRDMDKNRKLLGENVDVRNIVVQKDESLNIDLQNNAVVPELHFKE 833
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.4 bits (48), Expect(2) = 2.1
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 808 PPXXXPPXGXPFFXPXXXGAXAXXPXPPPXPPP 906
PP PP P P PPP PPP
Sbjct: 168 PPSFQPPSAAA---PATSLPSDYNPPPPPPPPP 197
Score = 22.6 bits (46), Expect(2) = 2.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 880 PXPPPXPPPP 909
P P P PPPP
Sbjct: 234 PLPAPPPPPP 243
>SPMIT.04 |cox3||cytochrome c oxidase 3|Schizosaccharomyces
pombe|chr mitochondrial|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -2
Query: 508 WFWCFISVFSFKCIYC--FLNGFKIDSLYVIIYFVGLIARYTVFTLFR 371
W + V F C+ +L+G+K S++ I F+GL+A T++ FR
Sbjct: 24 WPFFLSVVLFFNCLAATLYLHGYKHSSVFFGISFLGLLA--TMYLWFR 69
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 651 GGXXXPPPPXXXXXGGXGPPPPP 719
G PPPP PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 113 EFKDSVNIEKYRNIHILGIDSKNPIVQMDDTFYIGKYDNPFGTYL 247
++K S I + +IHI G+DS + VQ++ + D G++L
Sbjct: 84 DYKKSGKIPYFADIHISGVDS-SKFVQLNRPNNVSSGDGSDGSFL 127
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +1
Query: 787 PPHXRPXPPXXXPPXGXPFFXPXXXGAXAXXPXPPPXPPPP 909
PP +P P PP A P PP PPPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSL-------PSAVPPMPPKVPPPP 205
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 410 NKIDDDVKAVNFKTVQEAINTFK 478
N DDD+K +N + + E I TFK
Sbjct: 839 NFSDDDLKLMNEEEIMEQIETFK 861
>SPCC11E10.07c |||translation initiation factor eIF2B alpha
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 206 FYIGKYDNPFGTYLFFEEDPSPNTDDP 286
F + +YD PF + +DPSP T P
Sbjct: 253 FPLSQYDIPFSRPILEFDDPSPETVHP 279
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 802 PXPPXXXPPXGXPFFXPXXXGAXAXXPXPPPXPPPP 909
P P PP P A P P PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -2
Query: 190 YNWIFTINTQYVNISVFFDINTVLEFK---IHQNFFLTII*CIIFHFKFYETQILRIP 26
++ +TI ++ +I++ + +K I NFF + C + +F E LR+P
Sbjct: 40 FSQFWTIWMKFFSIALVIITQIYVGYKTKNIGWNFFSVVTYCFVLFLQFAEQSTLRVP 97
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 8.5
Identities = 22/79 (27%), Positives = 26/79 (32%)
Frame = +3
Query: 654 GXXXPPPPXXXXXGGXGPPPPPNXXGXPXPFLGKXGXXLXPXXAXPPPPPXXPXXXXPXX 833
G P PP G PP P G P + + + P A PP P P P
Sbjct: 488 GTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQP-PMVPPGMALPPGMP-APFPGYPAV 545
Query: 834 XSFFXSPXXGGXGXPPXXP 890
+ P G PP P
Sbjct: 546 PAM---PGIPGATAPPGAP 561
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,187,489
Number of Sequences: 5004
Number of extensions: 71543
Number of successful extensions: 320
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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