Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_L12
         (911 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     25   0.96 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   0.96 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   5.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   6.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   8.9  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 25.0 bits (52), Expect = 0.96
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 239 TYLFFEEDPSPNTDDPLFDRLSEKNLKYVCK 331
           T L FEEDP P      F R+ + N+  +CK
Sbjct: 112 TNLTFEEDPEP------FGRVRDHNISALCK 136


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.0 bits (52), Expect = 0.96
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = -1

Query: 410 WIDCQVHSLHPL*ET-HKHVASECIFLFCKHILNFFQTIYQTVGHQY 273
           W+     SL PL    ++H  SE     C    NFF  IY T+G  Y
Sbjct: 166 WLGAACISLPPLLIMGNEHTYSETGPSHCVVCQNFFYQIYATLGSFY 212


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 451 GFKIDSLYVIIYFVGLIARYTVFTLFRRHI 362
           GF   S+++ +    LI  +  F + RRH+
Sbjct: 8   GFSASSVFLSLLIPALILYFIYFRISRRHL 37


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 886  PPPXPPPP 909
            PPP PPPP
Sbjct: 1355 PPPPPPPP 1362


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 880 PXPPPXPPPP 909
           P P P PPPP
Sbjct: 339 PKPAPPPPPP 348


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 13/50 (26%), Positives = 23/50 (46%)
 Frame = +2

Query: 38  DLSFIKLKMENDALDDCEEEILVYLEFKDSVNIEKYRNIHILGIDSKNPI 187
           +LSF K  +  +    C+E + +       + +    NIHI G+ S N +
Sbjct: 374 NLSFDKQSLLKENTVTCQEAMHMLKNADSQLLVISDDNIHIKGVISLNKL 423


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 113 QDTPKFLPHNHLVHH 69
           +D P +  H+HL HH
Sbjct: 65  RDLPIYQSHHHLHHH 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,826
Number of Sequences: 438
Number of extensions: 8219
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)