Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_L09
(947 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 43 4e-04
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 43 4e-04
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 43 4e-04
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.44
03_02_0432 + 8392291-8392854 30 3.1
08_02_0017 - 11264038-11264260,11264376-11264653 29 4.1
01_06_0863 + 32536695-32536906,32537832-32538216 29 5.4
03_05_0067 - 20460206-20460703,20461255-20461530 29 7.1
02_02_0663 - 12740733-12741104,12741260-12741326,12741709-127418... 29 7.1
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 28 9.4
04_04_0675 + 27183826-27184443 28 9.4
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 28 9.4
03_01_0432 + 3339235-3339915,3340313-3340561,3341071-3341139,334... 28 9.4
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/77 (36%), Positives = 33/77 (42%)
Frame = +3
Query: 222 NPLFDKRPKNFAIGQGHSANSGLVQICKMAQVYPHPAPEGCTSXVV*KCPLRSTNLPRHW 401
NPLF+KRPK F IG L + K +V + K P R
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRL-KVPPALNQFTRTL 80
Query: 402 DKTTAKGLFKILEKYRP 452
DK A LFK+L KYRP
Sbjct: 81 DKNLATNLFKMLLKYRP 97
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 271 IQPTRDLSRFVRWPKYIRIQRQKAVLXASSESAPS 375
+ P +DL RFV+WPK +RIQRQ+ +L + P+
Sbjct: 38 LPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPA 72
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 311 PSISASSARRLYFXRRLKVPPPINQFTQTLGQD 409
P + +R +RLKVPP +NQFT+TL ++
Sbjct: 51 PKVVRIQRQRRILKQRLKVPPALNQFTRTLDKN 83
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/77 (36%), Positives = 33/77 (42%)
Frame = +3
Query: 222 NPLFDKRPKNFAIGQGHSANSGLVQICKMAQVYPHPAPEGCTSXVV*KCPLRSTNLPRHW 401
NPLF+KRPK F IG L + K +V + K P R
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRL-KVPPALNQFTRTL 64
Query: 402 DKTTAKGLFKILEKYRP 452
DK A LFK+L KYRP
Sbjct: 65 DKNLATNLFKMLLKYRP 81
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 271 IQPTRDLSRFVRWPKYIRIQRQKAVLXASSESAPS 375
+ P +DL RFV+WPK +RIQRQ+ +L + P+
Sbjct: 22 LPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPA 56
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 311 PSISASSARRLYFXRRLKVPPPINQFTQTLGQD 409
P + +R +RLKVPP +NQFT+TL ++
Sbjct: 35 PKVVRIQRQRRILKQRLKVPPALNQFTRTLDKN 67
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 42.7 bits (96), Expect = 4e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 271 IQPTRDLSRFVRWPKYIRIQRQKAVLXASSESAPS 375
+ P +DL RFVRWPK +RIQRQ+ VL + P+
Sbjct: 39 LPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPA 73
Score = 31.9 bits (69), Expect = 0.77
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 335 RRLYFXRRLKVPPPINQFTQTLGQD 409
+R +RLKVPP +NQFT+TL ++
Sbjct: 60 QRRVLKQRLKVPPALNQFTRTLDKN 84
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 222 NPLFDKRPKNFAIG 263
NPLF+KRPK F IG
Sbjct: 23 NPLFEKRPKQFGIG 36
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.7 bits (71), Expect = 0.44
Identities = 22/82 (26%), Positives = 28/82 (34%)
Frame = +3
Query: 696 PSRXWXKGPSXPPPVAXCXPXXNXPIALPPTKLWSLVEPRPPFSXXSWEXHPXXPSTXXL 875
P+R P PPP+ P PP L + + P PP + P
Sbjct: 613 PNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPP 672
Query: 876 QGXXRKPLGAGRGSSGNXVPTP 941
+ R P GA S G P P
Sbjct: 673 RSSSRTPTGAATSSKGPPPPPP 694
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/92 (27%), Positives = 30/92 (32%), Gaps = 2/92 (2%)
Frame = +2
Query: 677 PXKWAVPLPAXXQGAKXPAPGXPLXPPQXXAHCXTSYQIVESG-*TPPSXLXXVVGXPSX 853
P + P PA G K PAP P PP+ + T G PP +
Sbjct: 646 PNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNG 705
Query: 854 PXFNQXPPRXXPQATGGRA-GFLRXXSXNPPP 946
P PP P R+ G PPP
Sbjct: 706 PGVPSAPPPPPPPPPANRSNGPSAPAPPLPPP 737
>03_02_0432 + 8392291-8392854
Length = 187
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = -2
Query: 868 LVEGWXGWXSHDXXEXGGRGSTRLHNLVGGXAMGXXLXGXQXATGGGXLGPLXXXREGXG 689
L EG W S D R STR+ G G G + GG LGPL + G
Sbjct: 129 LEEGNRHWQSRDARATSWRSSTRVAKAAAGDDAGG--VGQKEKEGGKGLGPLPKREKEEG 186
>08_02_0017 - 11264038-11264260,11264376-11264653
Length = 166
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 708 WXKGP-SXPPPVAXCXPXXNXPIALPP 785
W GP S P P A C P P+ +PP
Sbjct: 125 WPHGPVSNPQPAAPCSPPSVTPLGVPP 151
>01_06_0863 + 32536695-32536906,32537832-32538216
Length = 198
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 850 GWXSHDXXEXGGRGSTRLHNLVGGXAMG 767
GW HD + GGRG + +L GG G
Sbjct: 2 GWRWHDDGDDGGRGLGDIPDLAGGGGGG 29
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = +3
Query: 690 PXPSRXWXKGPSXPPPVAXCXPXXNXPI----ALPPTKLWSLVEPRPP 821
P P W GP PP P P A PP +W +P PP
Sbjct: 4 PPPPPQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWG--QPPPP 49
>02_02_0663 -
12740733-12741104,12741260-12741326,12741709-12741809,
12741852-12742273,12743678-12743685,12745164-12745396
Length = 400
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 672 YXXKNGPXPSRX-WXKGPSXPPPVAXCXPXXNXPIALPP 785
Y GP P R W P PPP P P A PP
Sbjct: 32 YASAAGPPPKRPRWEPPPYLPPPPPYPIPQPARPRAAPP 70
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/74 (27%), Positives = 23/74 (31%)
Frame = +3
Query: 720 PSXPPPVAXCXPXXNXPIALPPTKLWSLVEPRPPFSXXSWEXHPXXPSTXXLQGXXRKPL 899
P PPP+ +PP K + P P P P G R P
Sbjct: 557 PVMPPPIPKLLSPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPP 616
Query: 900 GAGRGSSGNXVPTP 941
A GSS P P
Sbjct: 617 PAMPGSSKTRPPPP 630
>04_04_0675 + 27183826-27184443
Length = 205
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 684 NGPXPSRXWXKGPSXPPPVAXCXPXXNXPIALPPTK 791
+GP PS + PS PPP A P P + PP K
Sbjct: 95 DGPSPSASPSQSPSPPPP-ASPPPLPPAPSSPPPKK 129
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 865 PXXSKAPPASHWGPGGVPPXTXXQPPA 945
P S++ P ++ G GG PP + PPA
Sbjct: 1181 PSPSQSAPPANTGGGGSPPPSHGSPPA 1207
>03_01_0432 +
3339235-3339915,3340313-3340561,3341071-3341139,
3341292-3341414,3341526-3341738
Length = 444
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 336 LALDADILGPSYKSGQVPSWLNAPDQWQSSLASYRREDSRSSW 208
+A DA I Y+S VPSWL + + R S S W
Sbjct: 354 MAFDAVIFATGYRSN-VPSWLQEDGELFTEEGKLRSSGSSSEW 395
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,813,905
Number of Sequences: 37544
Number of extensions: 599073
Number of successful extensions: 1605
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1588
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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