Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_L03
         (926 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    31   2.2  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    31   2.2  

>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/53 (35%), Positives = 21/53 (39%)
 Frame = +1

Query: 619 PXHPRGKXXXFWGPPXRFPXPLTXCPPVXSAAATGXXPPXKAG*YGXSPPXXG 777
           P H + K    +GPP   P P    PP   A   G  PP  A  YG  P   G
Sbjct: 116 PPHIQHKPAQQYGPPPPKPAPQYG-PPPQPAPQYGPPPPKPAPQYGPPPTQYG 167



 Score = 30.7 bits (66), Expect = 3.0
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 655 GPPXRFPXPLTXCPPVXSAAATGXXPPXKAG*YGXSPPXXGXRG 786
           GPP   P      PP   +   G  PP  +G YG  PP  G  G
Sbjct: 434 GPPPPPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYG 477


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/53 (35%), Positives = 21/53 (39%)
 Frame = +1

Query: 619 PXHPRGKXXXFWGPPXRFPXPLTXCPPVXSAAATGXXPPXKAG*YGXSPPXXG 777
           P H + K    +GPP   P P    PP   A   G  PP  A  YG  P   G
Sbjct: 116 PPHIQHKPAQQYGPPPPKPAPQYG-PPPQPAPQYGPPPPKPAPQYGPPPTQYG 167



 Score = 30.7 bits (66), Expect = 3.0
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 655 GPPXRFPXPLTXCPPVXSAAATGXXPPXKAG*YGXSPPXXGXRG 786
           GPP   P      PP   +   G  PP  +G YG  PP  G  G
Sbjct: 434 GPPPPPPSGNYGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYG 477


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,369,617
Number of Sequences: 53049
Number of extensions: 506221
Number of successful extensions: 701
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)