Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_K23
(1011 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.20
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 9.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 9.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 397 PPPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
P PPP GG PP PPPP PPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 34.3 bits (75), Expect = 0.028
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 397 PPPPPFXXXGGXPPXPPPP 453
PPPPP G PP PPPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPP 782
Score = 33.9 bits (74), Expect = 0.037
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 360 PPXXFFWGXFXXPPPPPFXXXGGGPPXXPPP 452
PP G PPPPP G GPP PPP
Sbjct: 753 PPAPIMGGP--PPPPPPPGVAGAGPPPPPPP 781
Score = 33.9 bits (74), Expect = 0.037
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 397 PPPPPFXXXGGXPPXPPPP 453
PPPPP G PP PPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPP 781
Score = 33.1 bits (72), Expect = 0.064
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 360 PPXXFFWGXFXXPPPPPFXXXGGGPPXXPPP 452
PP G PPPPP G PP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.34
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 397 PPPPPFXXXGGXPPXPPPP 453
PPPP G PP PPPP
Sbjct: 765 PPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.60
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 396 PPPPPFXXXGGGPPXXPPP 452
P PPP GG PP PPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPP 768
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.20
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 397 PPPPPFXXXGGXPPXPPPPXXXXXSLFSPPPRGG 498
PPPPP PP PPPP P + G
Sbjct: 12 PPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSG 45
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 424 GGXPPXPPPPXXXXXSLFSPPPRGG 498
G PP PPPP S PPP G
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 396 PPPPPFXXXGGGPPXXPPP 452
PPPPP PP PPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPP 453
PPPP G PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPP 26
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 397 PPPPPFXXXGGXPPXPPPP 453
PPPPP P PPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 397 PPPPPFXXXGGXPPXPPPP 453
PPPPP P PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 2.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 396 PPPPPFXXXGGGPPXXPPP 452
PPPP GPP PPP
Sbjct: 1715 PPPPSAPPMPAGPPSAPPP 1733
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 397 PPPPPFXXXGGXPPXPPPPXXXXXSLFSPPPRG 495
PPPP PP PPP S S P G
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
PPPP G PPP PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
PPPP G PPP PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
PPPP G PPP PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
PPPP G PPP PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
PPPP G PPP PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
PPPP G PPP PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
PPPP G PPP PPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
PPPP G PPP PPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 400 PPPPFXXXGGXPPXPPPPXXXXXSLFSPPP 489
PPPP G PPP PPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 396 PPPPPFXXXGGGPPXXPP 449
PPPPP GPP P
Sbjct: 1883 PPPPPMALPKAGPPSAAP 1900
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,585,696
Number of Sequences: 5004
Number of extensions: 21768
Number of successful extensions: 171
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 525259918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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