BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_K21
(909 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA ... 36 0.10
>AE014296-73|AAF47371.2| 1314|Drosophila melanogaster CG13881-PA
protein.
Length = 1314
Score = 35.5 bits (78), Expect = 0.10
Identities = 30/125 (24%), Positives = 50/125 (40%)
Frame = +3
Query: 237 EQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGSARRRERQGQGRLWNSRGRT 416
+QQ+ L ++K AQDF K D S+ Q SL+ S+R R G N +
Sbjct: 794 QQQYADLKQNKYAQDFFKHVNDVKRSIYQSEMKRNNSLE-SSRSGPRAGGSTKSNVKASP 852
Query: 417 SSARAEELRKGPPGRREKTPXXSAXSCRPAVXNXVQEIPKVXEXKVSSNVQETNXKMXPK 596
A ++E R ++ + PA +Q + E V+ + + K P
Sbjct: 853 KRAASQETRLVTTLPLSRSRLSAGVKPTPAPRTSLQTPTPLPETTVAKDPTPSKRKSQPT 912
Query: 597 IKAAY 611
++ Y
Sbjct: 913 VRREY 917
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,067,610
Number of Sequences: 53049
Number of extensions: 483810
Number of successful extensions: 1386
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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