Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_K19
(856 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 26 0.66
07_03_0558 + 19461369-19462448 31 1.5
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.5
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 30 2.0
07_03_0890 - 22332768-22333382 25 2.7
12_02_1174 - 26696869-26698191 29 3.6
06_03_0757 + 24267599-24268882 29 3.6
03_02_0784 - 11154395-11154888,11155284-11155360,11155447-111554... 25 5.5
07_03_1771 - 29404972-29405175,29405282-29405677 24 6.0
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 29 6.2
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 8.3
07_03_0560 + 19479597-19480667 28 8.3
07_03_0559 + 19475893-19476783 28 8.3
05_01_0142 - 940421-940701,941262-941574 28 8.3
02_04_0407 + 22645775-22645865,22645998-22646269 28 8.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 24 8.5
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 25.8 bits (54), Expect(2) = 0.66
Identities = 19/80 (23%), Positives = 19/80 (23%)
Frame = +3
Query: 324 GXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPPXXXPXXXXGGGXFFFFXXXXXX 503
G PPPP G PP PP P G
Sbjct: 299 GHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGS-----GPPPPP 353
Query: 504 XXXXPXFSXPPXXGXXXPPP 563
P PP G PPP
Sbjct: 354 PPAAPAAPRPPGPGPGPPPP 373
Score = 24.6 bits (51), Expect(2) = 0.66
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 312 PPPXGXXPPPPP 347
PPP G PP PP
Sbjct: 277 PPPAGPPPPAPP 288
>07_03_0558 + 19461369-19462448
Length = 359
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 449 GXXXGGXXXXXXXPXXGGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
G GG GGG F G +GGGGG GGG
Sbjct: 204 GVGGGGGFGGGGGSGLGGGQGGGFGAGGGAGGGIGGGGGFGGGGGG 249
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/91 (27%), Positives = 25/91 (27%)
Frame = -3
Query: 584 GXXXXGGXGGAXXPXXGGXRKXXGXXXXGXXXXKKKKXPPPXXXXGXXXGGXXXXXXXPX 405
G GG GG GG G G G GG
Sbjct: 55 GGGFGGGGGGGLGGGGGGLGGGHGGGFGGGGGLGG--GASGGVGGGGGFGGGGGGGLGGG 112
Query: 404 XGGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
GGG G LGGGGG GGG
Sbjct: 113 QGGGFGGGAGAGGGAGGGLGGGGGFGGGGGG 143
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPP 437
PPP PPPPP K PP G PP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 449 GXXXGGXXXXXXXPXXGGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
G GG GGG + P G GGGGG GGG
Sbjct: 34 GAGGGGVGGRGGRGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGG 79
>07_03_0890 - 22332768-22333382
Length = 204
Score = 25.0 bits (52), Expect(2) = 2.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 314 PPLXXXPPPPPP 349
PP PPPPPP
Sbjct: 78 PPAEATPPPPPP 89
Score = 23.4 bits (48), Expect(2) = 2.7
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +2
Query: 332 PPPPPPXXX*XPXGGKKXXXXPP 400
PPPPPP P PP
Sbjct: 87 PPPPPPPERAVPEAADTPPPPPP 109
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPPXXXP 449
PPP PPPPP+ V+ PP PP P
Sbjct: 154 PPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPP 199
>06_03_0757 + 24267599-24268882
Length = 427
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -3
Query: 401 GGGXXXXFYPXXGXXXXLGGGGGXXPXGGGXKXTF*KXGVWG 276
GGG P G GGGGG GGG + TF G G
Sbjct: 232 GGGFGSGSCPPGGCISS-GGGGGGSGSGGGARQTFPGGGTGG 272
>03_02_0784 -
11154395-11154888,11155284-11155360,11155447-11155497,
11155599-11155672,11156127-11156215,11156533-11156618,
11157570-11157669,11158540-11158622,11158776-11159194
Length = 490
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 314 PPLXXXPPPPPP 349
PP PPPPPP
Sbjct: 424 PPYAPPPPPPPP 435
Score = 22.2 bits (45), Expect(2) = 5.5
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 332 PPPPPPXXX*XPXGGKKXXXXP 397
PPPPPP P G P
Sbjct: 432 PPPPPPPPQALPLPGSYNFAEP 453
>07_03_1771 - 29404972-29405175,29405282-29405677
Length = 199
Score = 24.2 bits (50), Expect(2) = 6.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 317 PLXXXPPPPPP 349
PL PPPPPP
Sbjct: 14 PLPPPPPPPPP 24
Score = 23.0 bits (47), Expect(2) = 6.0
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 332 PPPPPPXXX*XPXGGKKXXXXPPXXG 409
PPPPPP P K P G
Sbjct: 16 PPPPPPPPPPLPPAHKDKAAYNPYSG 41
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = -3
Query: 449 GXXXGGXXXXXXXPXXGGGXXXXFYPXXGXXXXLGGGGGXXPXGGGXKXTF*KXGVWGET 270
G GG G G P G GGGGG GGG G+ G T
Sbjct: 244 GGGGGGNCGLGLGFGEGTGFGVGAGPGAGTGAITGGGGGGKGGGGGGGGNT-GGGIGGST 302
Query: 269 PXGGK 255
GG+
Sbjct: 303 GGGGR 307
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPP 400
PPL PPPPPP P PP
Sbjct: 428 PPLPPPPPPPPPPPPPLPPNMPPPLPPPP 456
>07_03_0560 + 19479597-19480667
Length = 356
Score = 28.3 bits (60), Expect = 8.3
Identities = 25/94 (26%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Frame = -3
Query: 584 GXXXXGGXGGAXXPXXGGXRKXXGXXXXGXXXXKKKKXPPPXXXXGXXXGGXXXXXXXPX 405
G G GG GG G G K+ G GG
Sbjct: 155 GVGGGSGTGGGLGGGGGGGFGGDGGGGLGGGGGKEGGFGAGGGVGGGAGGGGGMGGGGGG 214
Query: 404 X---GGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
GGG F G GGGGG GGG
Sbjct: 215 GFGGGGGKGGGFGAGGGMGGGAGGGGGLGGGGGG 248
>07_03_0559 + 19475893-19476783
Length = 296
Score = 28.3 bits (60), Expect = 8.3
Identities = 26/104 (25%), Positives = 28/104 (26%)
Frame = -3
Query: 623 GXXXGXXXXXXXXGXXXXGGXGGAXXPXXGGXRKXXGXXXXGXXXXKKKKXPPPXXXXGX 444
G G G G GG+ GG + G G G
Sbjct: 108 GVGGGSGAGGGLGGGGGGGFGGGSGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGG 167
Query: 443 XXGGXXXXXXXPXXGGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
GG GGG F G GGGGG GGG
Sbjct: 168 GFGGGGGGGIG--GGGGKGGGFGAGGGVGGAAGGGGGMGSGGGG 209
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPPXXXP 449
PPP G PPPP G PP G PP P
Sbjct: 55 PPPPGAYPPPP--GAYPPQHGYPQPGGYPPPGGYPQHGGYPPAGYP 98
>02_04_0407 + 22645775-22645865,22645998-22646269
Length = 120
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 410 PXXGGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
P GGG YP G GGGG P GGG
Sbjct: 53 PPRGGGYG---YPGRGYGYPGRGGGGGYPGGGG 82
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 23.8 bits (49), Expect(2) = 8.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 296 KRXFXXPPLXXXPPPPP 346
K F PP PPPPP
Sbjct: 558 KPAFSPPPPPPPPPPPP 574
Score = 22.6 bits (46), Expect(2) = 8.5
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +2
Query: 320 LXXXPPPPPPXXX*XPXGGKKXXXXPP 400
L PPPPPP P PP
Sbjct: 598 LVPSPPPPPPPPPILPNRSVPPPPPPP 624
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,244,830
Number of Sequences: 37544
Number of extensions: 368901
Number of successful extensions: 7825
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5298
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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