Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_K19
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.34
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.34
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.45
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.45
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.45
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.4
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 29 5.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 5.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 5.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 24 9.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 9.7
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 9.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 9.7
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.20
Identities = 29/104 (27%), Positives = 29/104 (27%)
Frame = -3
Query: 623 GXXXGXXXXXXXXGXXXXGGXGGAXXPXXGGXRKXXGXXXXGXXXXKKKKXPPPXXXXGX 444
G G G GG GG GG G G PPP G
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGG-GGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGG 120
Query: 443 XXGGXXXXXXXPXXGGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
GG GGG G GGGGG GGG
Sbjct: 121 GCGGGGGGCGGGCGGGGGGGC---GGGGGGGCGGGGGGCGGGGG 161
Score = 28.7 bits (61), Expect = 5.6
Identities = 26/89 (29%), Positives = 26/89 (29%), Gaps = 3/89 (3%)
Frame = -3
Query: 569 GGXGGAXXPXXGGXRKXXGXXXXGXXXXKKKKXPPPXXXXGXXXGGXXXXXXXPXX---G 399
GG GG GG G G PPP G GG G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 398 GGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
GG G GGGGG GGG
Sbjct: 83 GGCGGGGGGCGGGGGGCGGGGG---CGGG 108
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/86 (27%), Positives = 27/86 (31%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGGXXFXXXXPXXXAPXXXXGGGXFFFXXX 493
P + PPPPPP P G PP G + P P G +
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMG---GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMY---P 364
Query: 494 XXPXXXXPXFFXSPXXXGXXPPPXPP 571
P P P G PPP PP
Sbjct: 365 PPPPSRPP---APPSGHGMIPPPPPP 387
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/99 (24%), Positives = 25/99 (25%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPPXXXPXXXXGGGXFFFFXX 491
PPP P PPP G+ PP G PP G
Sbjct: 265 PPPPSVTPMPPPMPPTP---GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG--------M 313
Query: 492 XXXXXXXXPXFSXPPXXGXXXPPPXPXXXXXXXXXXXPP 608
P PP G PPP P PP
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/86 (27%), Positives = 27/86 (31%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGGXXFXXXXPXXXAPXXXXGGGXFFFXXX 493
P + PPPPPP P G PP G + P P G +
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMG---GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMY---P 374
Query: 494 XXPXXXXPXFFXSPXXXGXXPPPXPP 571
P P P G PPP PP
Sbjct: 375 PPPPSRPP---APPSGHGMIPPPPPP 397
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/99 (24%), Positives = 25/99 (25%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPPXXXPXXXXGGGXFFFFXX 491
PPP P PPP G+ PP G PP G
Sbjct: 275 PPPPSVTPMPPPMPPTP---GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPG--------M 323
Query: 492 XXXXXXXXPXFSXPPXXGXXXPPPXPXXXXXXXXXXXPP 608
P PP G PPP P PP
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXG 409
PP+ PPPPPP P G PP G
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/86 (31%), Positives = 28/86 (32%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGGXXFXXXXPXXXAPXXXXGGGXFFFXXX 493
PP+ PPPPPP P G PP GG P P GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITG--GPPPPPPPGGLPPISGGP--PPPPPPPGG------CP 769
Query: 494 XXPXXXXPXFFXSPXXXGXXPPPXPP 571
P P F G PPP PP
Sbjct: 770 PPPPPPPPGGF-----KGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGG 412
PP PPPPPP P GG K PP G
Sbjct: 763 PPPGGCPPPPPP----PPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXG 410
PPP G PPPPP G K PP G
Sbjct: 762 PPPPGGCPPPPP---PPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXG 409
PP+ PPPPPP P G PP G
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/86 (31%), Positives = 28/86 (32%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGGXXFXXXXPXXXAPXXXXGGGXFFFXXX 493
PP+ PPPPPP P G PP GG P P GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITG--GPPPPPPPGGLPPISGGP--PPPPPPPGG------CP 769
Query: 494 XXPXXXXPXFFXSPXXXGXXPPPXPP 571
P P F G PPP PP
Sbjct: 770 PPPPPPPPGGF-----KGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGG 412
PP PPPPPP P GG K PP G
Sbjct: 763 PPPGGCPPPPPP----PPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXG 410
PPP G PPPPP G K PP G
Sbjct: 762 PPPPGGCPPPPP---PPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXG 409
PP+ PPPPPP P G PP G
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/86 (31%), Positives = 28/86 (32%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGGXXFXXXXPXXXAPXXXXGGGXFFFXXX 493
PP+ PPPPPP P G PP GG P P GG
Sbjct: 303 PPITGGPPPPPPPGGLPPITG--GPPPPPPPGGLPPISGGP--PPPPPPPGG------CP 352
Query: 494 XXPXXXXPXFFXSPXXXGXXPPPXPP 571
P P F G PPP PP
Sbjct: 353 PPPPPPPPGGF-----KGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGG 412
PP PPPPPP P GG K PP G
Sbjct: 346 PPPGGCPPPPPP----PPPGGFKGGPPPPPPPG 374
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXG 410
PPP G PPPPP G K PP G
Sbjct: 345 PPPPGGCPPPPP---PPPPGGFKGGPPPPPPPG 374
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/91 (25%), Positives = 24/91 (26%)
Frame = -3
Query: 584 GXXXXGGXGGAXXPXXGGXRKXXGXXXXGXXXXKKKKXPPPXXXXGXXXGGXXXXXXXPX 405
G GG GG GG G G G G
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQG 114
Query: 404 XGGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
GGG F G +GGGGG GG
Sbjct: 115 GGGGGGFNFNDIGGLINSMGGGGGGGQRQGG 145
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/104 (25%), Positives = 27/104 (25%)
Frame = -3
Query: 623 GXXXGXXXXXXXXGXXXXGGXGGAXXPXXGGXRKXXGXXXXGXXXXKKKKXPPPXXXXGX 444
G G G GG G A P G G G P G
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
Query: 443 XXGGXXXXXXXPXXGGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
GG GGG G GGGGG GGG
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 129
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/104 (25%), Positives = 27/104 (25%)
Frame = -3
Query: 623 GXXXGXXXXXXXXGXXXXGGXGGAXXPXXGGXRKXXGXXXXGXXXXKKKKXPPPXXXXGX 444
G G G GG G A P G G G P G
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG 85
Query: 443 XXGGXXXXXXXPXXGGGXXXXFYPXXGXXXXLGGGGGXXPXGGG 312
GG GGG G GGGGG GGG
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 129
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/86 (29%), Positives = 26/86 (30%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGGXXFXXXXPXXXAPXXXXGGGXFFFXXX 493
PP PPPPPP P G PP G P +P G
Sbjct: 253 PPAGSPPPPPPPKGS-PPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGS-----PP 302
Query: 494 XXPXXXXPXFFXSPXXXGXXPPPXPP 571
P P P G PPP PP
Sbjct: 303 PPPAGGSP----PPPRAGSPPPPPPP 324
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGG 412
PP PPPPPP P G PP GG
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGS----LPPPQAGG 340
Score = 27.9 bits (59), Expect(2) = 1.7
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPP 437
PPP PPPPP PP G PP
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 21.0 bits (42), Expect(2) = 1.7
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 531 PPXXGXXXPPPXP 569
PP G PPP P
Sbjct: 342 PPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/86 (29%), Positives = 26/86 (30%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGGXXFXXXXPXXXAPXXXXGGGXFFFXXX 493
PP PPPPPP P G PP G P +P G
Sbjct: 238 PPAGSPPPPPPPKGS-PPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGS-----PP 287
Query: 494 XXPXXXXPXFFXSPXXXGXXPPPXPP 571
P P P G PPP PP
Sbjct: 288 PPPAGGSP----PPPRAGSPPPPPPP 309
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGG 412
PP PPPPPP P G PP GG
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGS----LPPPQAGG 325
Score = 27.9 bits (59), Expect(2) = 1.7
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPP 437
PPP PPPPP PP G PP
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 21.0 bits (42), Expect(2) = 1.7
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 531 PPXXGXXXPPPXP 569
PP G PPP P
Sbjct: 327 PPPAGTGSPPPPP 339
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/86 (29%), Positives = 26/86 (30%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGGXXFXXXXPXXXAPXXXXGGGXFFFXXX 493
PP PPPPPP P G PP G P +P G
Sbjct: 232 PPAGSPPPPPPPKGS-PPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGS-----PP 281
Query: 494 XXPXXXXPXFFXSPXXXGXXPPPXPP 571
P P P G PPP PP
Sbjct: 282 PPPAGGSP----PPPRAGSPPPPPPP 303
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 314 PPLXXXPPPPPPXXX*XPXGGKKXXXXPPXXGG 412
PP PPPPPP P G PP GG
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGS----LPPPQAGG 319
Score = 27.9 bits (59), Expect(2) = 1.7
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPP 437
PPP PPPPP PP G PP
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 21.0 bits (42), Expect(2) = 1.7
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +3
Query: 531 PPXXGXXXPPPXP 569
PP G PPP P
Sbjct: 321 PPPAGTGSPPPPP 333
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/86 (27%), Positives = 25/86 (29%)
Frame = -3
Query: 569 GGXGGAXXPXXGGXRKXXGXXXXGXXXXKKKKXPPPXXXXGXXXGGXXXXXXXPXXGGGX 390
GG G A P G G G P P G G G G
Sbjct: 249 GGPGPAGPPGPPGPPGQDGSG--GAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGT 306
Query: 389 XXXFYPXXGXXXXLGGGGGXXPXGGG 312
+ P GGGGG P GGG
Sbjct: 307 DAAYCPCPPRTPAGGGGGGDFPAGGG 332
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXG--VKXXXXXPPXXGXXXXXXXPPXXXPXXXXGG 467
PPP PPPPP G V PP PP P GG
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGG 588
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 305 FXXPPLXXXPPPPPPXXX*XPXGGKK 382
F P L PPPPPP GG+K
Sbjct: 55 FNVPTLKLPPPPPPPCGGGCGCGGRK 80
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPPXXXPXXXXGGGXFFFF 485
PPP G PPPPP PP G P P GG FF
Sbjct: 298 PPPRGHFPPPPPHFMGRGMP--PPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFF 353
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 312 PPPXGXXPPPPPQXXXXTXXGVKXXXXXPPXXGXXXXXXXPPXXXPXXXXGGGXFFFF 485
PPP G PPPPP PP G P P GG FF
Sbjct: 298 PPPRGHFPPPPPHFMGRGMP--PPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFF 353
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 24.2 bits (50), Expect(2) = 9.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 332 PPPPPPXXX*XPXGGKKXXXXPP 400
PPPPPP P G PP
Sbjct: 1358 PPPPPPTMSKAPTGVPLPVPPPP 1380
Score = 21.8 bits (44), Expect(2) = 9.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 317 PLXXXPPPPPP 349
P PPPPPP
Sbjct: 1336 PSPPPPPPPPP 1346
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 312 PPPXGXXPPPPP 347
PPP G PPPPP
Sbjct: 792 PPPLGIIPPPPP 803
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 312 PPPXGXXPPPPP 347
PPP G PPPPP
Sbjct: 143 PPPTGQYPPPPP 154
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 312 PPPXGXXPPPPP 347
PPP G PPPPP
Sbjct: 88 PPPHGLGPPPPP 99
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 312 PPPXGXXPPPPP 347
PPP G PPPPP
Sbjct: 792 PPPLGIIPPPPP 803
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,098,889
Number of Sequences: 27780
Number of extensions: 196822
Number of successful extensions: 2535
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1669
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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