Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_K18
(901 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 162 1e-39
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 162 1e-39
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 162 1e-39
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 162 1e-39
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 162 1e-39
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 162 1e-39
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 162 2e-39
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 161 2e-39
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 161 2e-39
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 161 2e-39
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 161 2e-39
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 161 2e-39
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 161 2e-39
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 161 2e-39
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 161 2e-39
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 161 2e-39
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 160 5e-39
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 160 5e-39
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 160 5e-39
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 156 9e-38
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 156 9e-38
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 156 9e-38
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 152 2e-36
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 97 1e-19
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 65 4e-10
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 65 4e-10
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 65 4e-10
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 65 4e-10
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 65 4e-10
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 65 4e-10
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 65 4e-10
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 65 4e-10
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 65 4e-10
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 60 1e-08
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 60 1e-08
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 60 1e-08
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 60 1e-08
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 5.7
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 5.7
U16258-1|AAA85819.1| 481|Homo sapiens I kappa BR protein. 31 5.7
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 5.7
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 5.7
AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy ch... 31 5.7
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 5.7
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 5.7
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 31 7.5
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 31 7.5
BC000527-1|AAH00527.1| 354|Homo sapiens EWSR1 protein protein. 31 7.5
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 31 7.5
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 31 7.5
AK128829-1|BAC87629.1| 385|Homo sapiens protein ( Homo sapiens ... 30 10.0
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 154 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 206
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 207 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 237
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 162 bits (394), Expect = 1e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 162 bits (393), Expect = 2e-39
Identities = 87/151 (57%), Positives = 101/151 (66%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y PR R G Q+ S
Sbjct: 114 VEGEKGEEAANVTGPGGVPVQGSKYAAD--RNHYRRY-PR----RRGPPRNYQQNYQNSE 166
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 167 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 197
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 161 bits (392), Expect = 2e-39
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 161 bits (392), Expect = 2e-39
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 161 bits (392), Expect = 2e-39
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 216 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 257
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 161 bits (392), Expect = 2e-39
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 161 bits (392), Expect = 2e-39
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 161 bits (392), Expect = 2e-39
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 161 bits (392), Expect = 2e-39
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 161 bits (392), Expect = 2e-39
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 161 bits (392), Expect = 2e-39
Identities = 77/103 (74%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 79 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 120
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 160 bits (389), Expect = 5e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 545
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 113 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 155
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 160 bits (389), Expect = 5e-39
Identities = 78/105 (74%), Positives = 87/105 (82%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGR 545
V GEKG EAA VTGPGG PV+GS YAAD R ++R+Y R+G R
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRYPRRRGPPR 153
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 160 bits (389), Expect = 5e-39
Identities = 76/103 (73%), Positives = 86/103 (83%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+GDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG 539
V GEKG EAA VTGP G PV+GS YAAD+RR Y R Y+ R+ G
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYYGRRRG 187
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 156 bits (379), Expect = 9e-38
Identities = 83/141 (58%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EA VTGPGG PVKGS YA ++R+ R++ PR P I ++
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPRPPSVAP---PPMVAEIPSAG 203
Query: 591 XPRPTKGVHXGDEGQE-RRHC 650
+KG D GQ RR C
Sbjct: 204 TGPGSKGERAEDSGQRPRRWC 224
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 156 bits (379), Expect = 9e-38
Identities = 83/141 (58%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EA VTGPGG PVKGS YA ++R+ R++ PR P I ++
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPRPPSVAP---PPMVAEIPSAG 203
Query: 591 XPRPTKGVHXGDEGQE-RRHC 650
+KG D GQ RR C
Sbjct: 204 TGPGSKGERAEDSGQRPRRWC 224
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 156 bits (379), Expect = 9e-38
Identities = 83/141 (58%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG EA VTGPGG PVKGS YA ++R+ R++ PR P I ++
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIPRPPSVAP---PPMVAEIPSAG 203
Query: 591 XPRPTKGVHXGDEGQE-RRHC 650
+KG D GQ RR C
Sbjct: 204 TGPGSKGERAEDSGQRPRRWC 224
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 152 bits (368), Expect = 2e-36
Identities = 82/151 (54%), Positives = 98/151 (64%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSVGDGE VEF V
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSW 590
V GEKG +AA VTGPGG PV+GS YAAD R ++R+Y PR G Q+ S
Sbjct: 110 VEGEKGAKAANVTGPGGVPVQGSKYAAD--RNHYRRY-PRP----RGPPRNYQQNYQNSE 162
Query: 591 XPRPTKGVHXGDEGQERRHCTISAQFFPSQF 683
+G EGQ ++ + FP +
Sbjct: 163 SGEKNEGSESAPEGQAQQRRPYRRRRFPPYY 193
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 96.7 bits (230), Expect = 1e-19
Identities = 56/111 (50%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = +3
Query: 321 VFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKR 500
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA ++R
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 501 RGYHRQYFPRQGGGRXGEGAPTQRRIXTSWXPRPTKGVHXGDEGQE-RRHC 650
+ R++ PR P I ++ +KG D GQ RR C
Sbjct: 83 KS--RRFIPRPPSVAP---PPMVAEIPSAGTGPGSKGERAEDSGQRPRRWC 128
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 4e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGS 479
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 64.9 bits (151), Expect = 4e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGS 479
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 64.9 bits (151), Expect = 4e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGS 479
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 64.9 bits (151), Expect = 4e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGS 479
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 4e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGS 479
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 4e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGS 479
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 64.9 bits (151), Expect = 4e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGS 479
KG E+ VTGPGG P GS
Sbjct: 64 FKKSSKGLESIRVTGPGGSPCLGS 87
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 64.9 bits (151), Expect = 4e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGS 479
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 64.9 bits (151), Expect = 4e-10
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGS 479
KG E+ VTGPGG P GS
Sbjct: 87 FKKSSKGLESIRVTGPGGSPCLGS 110
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 59.7 bits (138), Expect = 1e-08
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 408 VVAGEKGFEAAGVTGPGG 461
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 59.7 bits (138), Expect = 1e-08
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 408 VVAGEKGFEAAGVTGPGG 461
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 59.7 bits (138), Expect = 1e-08
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 408 VVAGEKGFEAAGVTGPGG 461
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 59.7 bits (138), Expect = 1e-08
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +3
Query: 249 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 407
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 408 VVAGEKGFEAAGVTGPGG 461
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +3
Query: 417 GEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGE 554
GE+GF G+ GP GEP K P A RG P G GE
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGE 1011
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +3
Query: 417 GEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGE 554
GE+GF G+ GP GEP K P A RG P G GE
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGE 1011
>U16258-1|AAA85819.1| 481|Homo sapiens I kappa BR protein.
Length = 481
Score = 31.1 bits (67), Expect = 5.7
Identities = 29/87 (33%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Frame = +3
Query: 399 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYA-ADKRRGYHRQYFPRQGGGRXGEGAPTQRR 575
E +V E E A GE G A + RG HR P GGGR G P +
Sbjct: 299 ELSVAEDEDEEEEAEEAAHSGERTPGGRRGGALRERGRHRWPDPAAGGGRGASGPPGAAK 358
Query: 576 IXTSWXPRPTKG---VHXG-DEGQERR 644
+ W R G +H EGQ RR
Sbjct: 359 -GSKWNRRNDMGETLLHRACIEGQLRR 384
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +3
Query: 417 GEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGE 554
GE+GF G+ GP GEP K P A RG P G GE
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGE 587
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +3
Query: 417 GEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGE 554
GE+GF G+ GP GEP K P A RG P G GE
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGE 1011
>AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy chain
protein.
Length = 143
Score = 31.1 bits (67), Expect = 5.7
Identities = 21/48 (43%), Positives = 22/48 (45%)
Frame = +1
Query: 277 RVDMVSSTGMTPRKMCLCIRLPSPVTTHVRLCARSATERRWSLPWLPG 420
RV M S T +T M L L S T V CAR R W PW PG
Sbjct: 86 RVAMTSDTSVTTAYMELT-SLTSDDTA-VYFCARGDVNRNWLDPWGPG 131
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +3
Query: 417 GEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGE 554
GE+GF G+ GP GEP K P A RG P G GE
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGE 1008
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 31.1 bits (67), Expect = 5.7
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +3
Query: 417 GEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGE 554
GE+GF G+ GP GEP K P A RG P G GE
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGE 1014
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 252 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 344
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 252 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 344
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC000527-1|AAH00527.1| 354|Homo sapiens EWSR1 protein protein.
Length = 354
Score = 30.7 bits (66), Expect = 7.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +3
Query: 417 GEKGFEAAGVTGPG-GEPVKGSPYAADKRRGYHRQYFPR--QGGGRXGEGAPTQRRIXTS 587
G G E+ G +GPG + G R G+ R R +GGGR G G ++ + TS
Sbjct: 276 GVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQSESLVYTS 335
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 252 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 344
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.7 bits (66), Expect = 7.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 252 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 344
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AK128829-1|BAC87629.1| 385|Homo sapiens protein ( Homo sapiens
cDNA FLJ46309 fis, clone TESTI4039744. ).
Length = 385
Score = 30.3 bits (65), Expect = 10.0
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 426 GFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRIXTSWXPRPT 605
G A +T G P +G+P+ D R PR+GG E P TS RP
Sbjct: 17 GLAEALLTSQMGRPGRGAPHLPDGAAWQRRSSPPRRGG--RAEALP------TSQMGRPG 68
Query: 606 KGV-HXGDEGQERR 644
+G H D+G+ R
Sbjct: 69 RGAPHLPDDGRSGR 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,643,929
Number of Sequences: 237096
Number of extensions: 2454907
Number of successful extensions: 5699
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5675
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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