Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_K18
(901 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 136 3e-32
Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical pr... 91 1e-18
AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical ... 91 1e-18
U88173-8|AAK21380.1| 267|Caenorhabditis elegans C.elegans y-box... 89 4e-18
U80450-3|AAB37828.1| 265|Caenorhabditis elegans C.elegans y-box... 85 5e-17
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 56 5e-08
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 56 5e-08
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 56 5e-08
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 56 5e-08
U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protei... 30 2.6
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 29 6.0
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 136 bits (328), Expect = 3e-32
Identities = 66/107 (61%), Positives = 75/107 (70%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 410
V A KV GTVKWFNVK+GYGFINR DT ED+FVHQTAI NNP K +RS+GD E V F +
Sbjct: 16 VKATKVKGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDI 75
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXG 551
V G KG EAA VTGP G PV+GS YAAD+ + +G GR G
Sbjct: 76 VEGSKGLEAASVTGPDGGPVQGSKYAADRDAENAARGRGGRGRGRRG 122
>Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 90.6 bits (215), Expect = 1e-18
Identities = 55/120 (45%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRN---DTKEDVFVHQTAIARNNPRKA-VRSVGDGEAV 398
VI V G VKWF+V+ YGF+ R+ D ED FVHQTAI +++ K +R++ D E V
Sbjct: 84 VIETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPV 143
Query: 399 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYH-RQYFPRQGGGRXGEGAPTQRR 575
F +V G KG EAA VTGP GE V+GS +A + R +G G G GAP Q R
Sbjct: 144 VFDIVEGLKGPEAANVTGPDGENVRGSRFARTLLTHWRTRGRGGARGRGGRGRGAPRQTR 203
>AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 90.6 bits (215), Expect = 1e-18
Identities = 55/120 (45%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRN---DTKEDVFVHQTAIARNNPRKA-VRSVGDGEAV 398
VI V G VKWF+V+ YGF+ R+ D ED FVHQTAI +++ K +R++ D E V
Sbjct: 84 VIETGVKGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPV 143
Query: 399 EFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYH-RQYFPRQGGGRXGEGAPTQRR 575
F +V G KG EAA VTGP GE V+GS +A + R +G G G GAP Q R
Sbjct: 144 VFDIVEGLKGPEAANVTGPDGENVRGSRFARTLLTHWRTRGRGGARGRGGRGRGAPRQTR 203
>U88173-8|AAK21380.1| 267|Caenorhabditis elegans C.elegans y-box
protein 2 protein.
Length = 267
Score = 89.0 bits (211), Expect = 4e-18
Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Frame = +3
Query: 234 IAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRK-AVRSVGDGEAVEFAV 410
I + G VKW++V YGFI+RND ++D+FVHQTAIA++ K +R++GD E V F +
Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDL 121
Query: 411 VAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPR 530
V G+ G EAA VTGP G+ V GS Y + + PR
Sbjct: 122 VEGKNGPEAANVTGPNGDNVIGSRYRHKLLSRFRKNRKPR 161
>U80450-3|AAB37828.1| 265|Caenorhabditis elegans C.elegans y-box
protein 3 protein.
Length = 265
Score = 85.4 bits (202), Expect = 5e-17
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Frame = +3
Query: 231 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRK-AVRSVGDGEAVEFA 407
V+ + G VKW++V YGFI+R+D ++DVFVHQTAI++++ K +R++ D E V F
Sbjct: 59 VLTAGLQGKVKWYSVLRRYGFISRSDGEKDVFVHQTAISKSDTEKFYLRTLADEEEVLFD 118
Query: 408 VVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRXGEGAPTQRRI 578
+V G+ G EAA VTGP G V GS Y + + P+ G + T++ +
Sbjct: 119 LVDGKNGPEAANVTGPAGVNVSGSKYRHQLLSRFRKNRKPKIVVGEDFDSKETEKLV 175
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 55.6 bits (128), Expect = 5e-08
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 252 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVV--AGEK 425
G+ KWFNV GYGF+ + T ED+FVHQ+ N + RS+ +GE V + + + K
Sbjct: 24 GSCKWFNVSKGYGFVIDDITGEDLFVHQS----NLNMQGFRSLDEGERVSYYIQERSNGK 79
Query: 426 GFEAAGVTGP-GGEPVKGS 479
G EA V+G G+ +KGS
Sbjct: 80 GREAYAVSGEVEGQGLKGS 98
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 55.6 bits (128), Expect = 5e-08
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 252 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVV--AGEK 425
G+ KWFNV GYGF+ + T ED+FVHQ+ N + RS+ +GE V + + + K
Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQS----NLNMQGFRSLDEGERVSYYIQERSNGK 110
Query: 426 GFEAAGVTGP-GGEPVKGS 479
G EA V+G G+ +KGS
Sbjct: 111 GREAYAVSGEVEGQGLKGS 129
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 55.6 bits (128), Expect = 5e-08
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 252 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVV--AGEK 425
G+ KWFNV GYGF+ + T ED+FVHQ+ N + RS+ +GE V + + + K
Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQS----NLNMQGFRSLDEGERVSYYIQERSNGK 110
Query: 426 GFEAAGVTGP-GGEPVKGS 479
G EA V+G G+ +KGS
Sbjct: 111 GREAYAVSGEVEGQGLKGS 129
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 55.6 bits (128), Expect = 5e-08
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 252 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVV--AGEK 425
G+ KWFNV GYGF+ + T ED+FVHQ+ N + RS+ +GE V + + + K
Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQS----NLNMQGFRSLDEGERVSYYIQERSNGK 110
Query: 426 GFEAAGVTGP-GGEPVKGS 479
G EA V+G G+ +KGS
Sbjct: 111 GREAYAVSGEVEGQGLKGS 129
>U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protein
53 protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 417 GEKGFEAAGVTGPGGEPVK-GSPYAADKRRGYHRQYFPRQGGGRXG 551
G+KGF GV GP GEP + G Y +D G + PR G G
Sbjct: 49 GDKGFP--GVAGPAGEPGEPGHIYVSDGPPGKDGETGPRGPPGEKG 92
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 414 AGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGG--GRXGEGAPTQRRIXTS 587
AG KG AG GPGG+P P + R G + P + G G+ G P +
Sbjct: 173 AGNKG--PAGPPGPGGKPGPAGPPGENGRNGEPQPGSPGEPGRPGQPGSRGPAGQPGKDG 230
Query: 588 WXPRPTKGVHXGDEGQERR 644
P + G+ GQ R
Sbjct: 231 AQGGPGEKGANGEPGQPGR 249
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Frame = +3
Query: 432 EAAGVTGPGGEPVKGSPYAADKRR-GYHRQYFPRQ--GGGRXGEGAPTQRRIXTSWXPRP 602
+ A + G G V G A GYH Q GGG G + RR T P P
Sbjct: 406 QQAALGGGGALVVDGGALVAGGGAVGYHHQEHRSSYGGGGSSSNGGSSNRRRQTRRSPSP 465
Query: 603 TKGVHXGDEGQER 641
+ H Q R
Sbjct: 466 PQQHHSSSRRQRR 478
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Frame = +3
Query: 432 EAAGVTGPGGEPVKGSPYAADKRR-GYHRQYFPRQ--GGGRXGEGAPTQRRIXTSWXPRP 602
+ A + G G V G A GYH Q GGG G + RR T P P
Sbjct: 514 QQAALGGGGALVVDGGALVAGGGAVGYHHQEHRSSYGGGGSSSNGGSSNRRRQTRRSPSP 573
Query: 603 TKGVHXGDEGQER 641
+ H Q R
Sbjct: 574 PQQHHSSSRRQRR 586
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,363,725
Number of Sequences: 27780
Number of extensions: 323579
Number of successful extensions: 877
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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