Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_K16
(914 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.17
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.92
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.7
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.6
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXPXS*P 778
P P PPP PP APP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 29.5 bits (63), Expect = 0.70
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP P A PP APP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.92
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PP A PP PP P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPP 782
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 710 PPXPPPKXXAXPPGAPPXP 766
PP PPP PP PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +2
Query: 707 PPPXPPPKXX--AXPPGAPPXP 766
PPP PPP + PP +PP P
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRP 274
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXPXL 773
G P P G P P P P PP P G P P L
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 710 PPXPPPKXXAXPPGAPPXPXS*P 778
PP PP P APP P S P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAP 454
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 627 PKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
P P P P P P PP P P P P P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/46 (28%), Positives = 14/46 (30%)
Frame = +1
Query: 637 PXXGXGXRXXXPXTPXXPPXKKKXXPXPPPQTXRXXPRGPPXSXXL 774
P G R P P P P PP P G P + L
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -3
Query: 765 GXGGAPGGXAXXLXXXXXXXXXXXXGGXGGXGGXGPAPXARXGGXLGXPSPXXXRXPGFF 586
G GG P G GG GG GG GG G P GF
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Query: 585 XXGXXFGG 562
FGG
Sbjct: 256 GGPGGFGG 263
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/46 (30%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXP-PXKKKXXPXTPPPNXXPXPQGP 755
G P P G P P + P P P PPP+ P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 22.6 bits (46), Expect(2) = 5.7
Identities = 14/50 (28%), Positives = 15/50 (30%), Gaps = 3/50 (6%)
Frame = +3
Query: 627 PKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQ---GPPXXP 767
PK P P P P P PP P P+ G P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 21.8 bits (44), Expect(2) = 5.7
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 870 PAPPPQXXPPXXXP 911
P PPP PP P
Sbjct: 1209 PVPPPSTAPPVPTP 1222
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/48 (29%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = +3
Query: 627 PKXPXXGPGXPXXXPXNPXX-PPXKKKXXPXTPPPNXXPXPQGPPXXP 767
P P P P P P PP + P PP+ P P P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXPXL 773
P P P P + PP P PPP+ P P P +
Sbjct: 124 PPSAPAPPT--PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPI 167
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +3
Query: 627 PKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGP 755
P+ P P P P PP + P P P P P P
Sbjct: 104 PREPPL-PNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.151 0.545
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,586,910
Number of Sequences: 5004
Number of extensions: 16137
Number of successful extensions: 113
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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