Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_K16
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 38 0.008
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 37 0.017
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 37 0.017
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 37 0.023
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 37 0.023
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 37 0.023
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 36 0.031
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 36 0.031
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 36 0.031
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 35 0.071
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 35 0.071
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 34 0.12
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 34 0.12
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 34 0.12
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 34 0.12
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 34 0.16
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 34 0.16
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 34 0.16
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.16
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.16
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 34 0.16
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.16
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 34 0.16
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 33 0.22
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.38
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 33 0.38
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.38
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 32 0.50
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.50
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 32 0.66
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.87
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.87
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.87
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.87
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.1
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.0
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 30 2.0
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 30 2.7
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 30 2.7
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.5
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.5
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 29 3.5
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.5
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.5
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 3.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.5
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 29 3.5
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 3.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 29 4.6
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.6
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 4.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 4.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 4.6
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 4.6
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 4.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.6
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.6
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.6
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 6.1
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 6.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.1
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 6.1
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 6.1
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 6.1
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 8.1
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 28 8.1
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 28 8.1
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 28 8.1
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 28 8.1
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P P PG P P P + P P P P PQGPP P
Sbjct: 145 GQPGAPGNKGPSGPNGNPGAPGA-PGQPGQDAPSEPITPGAPGPQGTPGPQGPPGQP 200
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G P P PG P P +P PP P P P P P GPP
Sbjct: 88 GAPGLPG-NPGHPPQQPCDPITPP------PCQPCPQGPPGPPGPP 126
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P P TPPP P PQGPP P
Sbjct: 85 GKPGAPGL-PGNPGHPPQQP--------CDPITPPP-CQPCPQGPPGPP 123
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P P PG P P P + P P P P PQGPP P
Sbjct: 178 GQPGAPGNKGPSGPNGNPGAPGA-PGQPGQDAPSEPITPGAPGPQGTPGPQGPPGQP 233
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G P P PG P P +P PP P P P P P GPP
Sbjct: 121 GAPGLPG-NPGRPPQQPCDPITPP------PCQPCPQGPPGPPGPP 159
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P P TPPP P PQGPP P
Sbjct: 118 GKPGAPGL-PGNPGRPPQQP--------CDPITPPP-CQPCPQGPPGPP 156
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXX--PXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G PK P PG P P P P + P P P PQGPP P
Sbjct: 175 GQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSP 233
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P PP P P P P P GPP P
Sbjct: 121 GAPGLPG-NPGRPPQQPCEPITPP------PCKPCPQGPPGPPGPPGPP 162
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXX--PXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G PK P PG P P P P + P P P PQGPP P
Sbjct: 175 GQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSP 233
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P PP P P P P P GPP P
Sbjct: 121 GAPGLPG-NPGRPPQQPCEPITPP------PCKPCPQGPPGPPGPPGPP 162
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.023
Identities = 23/51 (45%), Positives = 24/51 (47%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXPXL 773
G P P PG P P NP P +K TPPP P PQGPP P L
Sbjct: 115 GKPGRPGK-PGAPGF-PGNPGKAP-QKPCEEITPPP-CKPCPQGPPGAPGL 161
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 36.7 bits (81), Expect = 0.023
Identities = 23/51 (45%), Positives = 24/51 (47%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXPXL 773
G P P PG P P NP P +K TPPP P PQGPP P L
Sbjct: 115 GKPGRPGK-PGAPGF-PGNPGKAP-QKPCEEITPPP-CKPCPQGPPGAPGL 161
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 36.7 bits (81), Expect = 0.023
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P P PG P P P + P P P P PQGPP P
Sbjct: 183 GQPGAAGDKGPAGPNGNPGAPGS-PGKPGEDGKSEPITPGAPGPAGPPGPQGPPGAP 238
Score = 34.7 bits (76), Expect = 0.093
Identities = 20/49 (40%), Positives = 22/49 (44%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P G P NP PP ++ P TPPP P PQGP P
Sbjct: 117 GKPGRP--GKAGAPGLPGNPGRPP-QQPCEPITPPP-CKPCPQGPAGPP 161
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G P P PG P P P PP P P P P GPP
Sbjct: 126 GAPGLPG-NPGRPPQQPCEPITPP------PCKPCPQGPAGPPGPP 164
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.031
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 591 NXGXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
N G G P P PG P P P + P P P PQGPP P
Sbjct: 176 NDGQPGAPGNKGPSGPNGNPGAPGA-PGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAP 233
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.031
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 591 NXGXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
N G G P P PG P P P + P P P PQGPP P
Sbjct: 176 NDGQPGAPGNKGPSGPNGNPGAPGA-PGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAP 233
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.031
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 591 NXGXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
N G G P P PG P P P + P P P PQGPP P
Sbjct: 176 NDGQPGAPGNKGPSGPNGNPGAPGA-PGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAP 233
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 36.3 bits (80), Expect = 0.031
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 591 NXGXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
N G G P P PG P P P + P P P PQGPP P
Sbjct: 176 NDGQPGAPGNKGPSGPNGNPGAPGA-PGQPGQDAPSEPITPGAPGPAGPAGPQGPPGAP 233
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 35.9 bits (79), Expect = 0.040
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 627 PKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQG 752
P P PG P P P PP ++ P PP P QG
Sbjct: 243 PPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPPGHQG 284
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 669 PXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
P P PP ++ P PP P P GPP
Sbjct: 246 PPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPP-PNXXPXPQGPPXXP 767
P GP P P P PP P P P+ P P GPP P
Sbjct: 210 PSPGPVDPSEDP-KPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPP 253
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 35.1 bits (77), Expect = 0.071
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXX--PXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXPX 770
G G PK P PG P P P P + P P P QGPP P
Sbjct: 165 GPDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPPG 224
Query: 771 LN 776
N
Sbjct: 225 SN 226
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXPXLN 776
G P P PG P P P PP P P P P P G P P N
Sbjct: 111 GAPGQPGT-PGRPPQQPCEPTTPP------PCQPCPQGPPGPPGQPGIPGDN 155
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 35.1 bits (77), Expect = 0.071
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P PG P P P + P P P P PQGPP P
Sbjct: 178 GQPGAPGNKGPSGQNGNPGAPGA-PGQPGQDAPSEPITPGAPGPQGAPGPQGPPGQP 233
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G P P PG P P +P PP P P P P P GPP
Sbjct: 121 GAPGLPG-NPGRPPQQPCDPITPP------PCQPCPQGPPGPPGPP 159
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P P TPPP P PQGPP P
Sbjct: 118 GKPGAPGL-PGNPGRPPQQP--------CDPITPPP-CQPCPQGPPGPP 156
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXX--PXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P G P P NP P + P P+ P PQGPP P
Sbjct: 169 GPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGAP 221
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +3
Query: 648 PGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
PG P NP PP K+ P TPPP P P+GPP
Sbjct: 110 PGAPGLN-GNPGRPP-KEPCEPITPPP-CKPCPEGPP 143
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +3
Query: 621 GXPKXPXXG--PGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQG 752
G P P PG P P P PP K P P P PQG
Sbjct: 108 GKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQG 153
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXX-PXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G G PK GPG P P P P PN P P+GPP
Sbjct: 185 GGSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPGPRGPP 239
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P PP P P P P P GPP P
Sbjct: 121 GAPGLPG-NPGRPPQQPCEPITPP------PWKPCPQGPPGPPGPPGPP 162
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G PK P PG P P + P P P PQGPP P
Sbjct: 184 GPKGPKGPPGAPGAPEHQESQEC--PRGEPLIPGEPGPPGEAGPQGPPGSP 232
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +3
Query: 648 PGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
PG P NP PP K+ P TPPP P P+GPP
Sbjct: 112 PGAPGLN-GNPGRPP-KEPCEPLTPPP-CKPCPEGPP 145
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 621 GXPKXPXXG--PGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G P P PG P P P PP P P P P P GPP
Sbjct: 110 GKPGAPGLNGNPGRPPKEPCEPLTPP------PCKPCPEGPPGPAGPP 151
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPP-PNXXPXPQGPP 758
G G K P PG P P P P K P PP P P P GPP
Sbjct: 146 GPAGPPGPDGNKGPLGPPGPPG--PEGPNGEPGNK--GPAGPPGPGGKPGPAGPP 196
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P PP P P P P P GPP P
Sbjct: 123 GAPGTPGT-PGKPPVAPCEPTTPP------PCKPCPQGPPGPPGPPGAP 164
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +3
Query: 648 PGXPXXX-PXNPXXPPXK--KKXXPXTPPPNXXPXPQGPP 758
PG P P P PP P P P P P GPP
Sbjct: 220 PGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPP 259
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXX--PXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P G P P NP P + P P+ P PQGPP P
Sbjct: 167 GPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGAP 219
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P PP P P P P P GPP P
Sbjct: 118 GAPGTPGT-PGKPPVAPCEPTTPP------PCKPCPQGPPGPPGPPGAP 159
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +3
Query: 648 PGXPXXX-PXNPXXPPXK--KKXXPXTPPPNXXPXPQGPP 758
PG P P P PP P P P P P GPP
Sbjct: 215 PGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPP 254
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P PP P P P P P GPP P
Sbjct: 125 GAPGQPGV-PGKPPTAPCEPTTPP------PCKPCPQGPPGPPGPPGAP 166
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +2
Query: 545 GXXSXXPPNXXPXXKKPGXRXXXGXGXPKXPPXRAX---GAGXXXXXXXXXXXXKKXPPP 715
G S PP PG G P PP G PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 716 XPPPKXXAXPPGAPPXP 766
PPP PP PP P
Sbjct: 761 PPPPPGGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P G P P PP P PPP GPP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +2
Query: 545 GXXSXXPPNXXPXXKKPGXRXXXGXGXPKXPPXRAX---GAGXXXXXXXXXXXXKKXPPP 715
G S PP PG G P PP G PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 716 XPPPKXXAXPPGAPPXP 766
PPP PP PP P
Sbjct: 761 PPPPPGGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P G P P PP P PPP GPP P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P PP P P P P P GPP P
Sbjct: 118 GAPGTPGT-PGKPPVAPCEPTTPP------PCKPCPQGPPGPPGPPGAP 159
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +3
Query: 648 PGXPXXX-PXNPXXPPXK--KKXXPXTPPPNXXPXPQGPP 758
PG P P P PP P P P P P GPP
Sbjct: 215 PGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPP 254
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +2
Query: 545 GXXSXXPPNXXPXXKKPGXRXXXGXGXPKXPPXRAX---GAGXXXXXXXXXXXXKKXPPP 715
G S PP PG G P PP G PPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 716 XPPPKXXAXPPGAPPXP 766
PPP PP PP P
Sbjct: 344 PPPPPGGCPPPPPPPPP 360
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P G P P PP P PPP GPP P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/49 (38%), Positives = 19/49 (38%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P PP P P P P P GPP P
Sbjct: 125 GAPGQPGV-PGKPPTAPCEPTTPP------PCKPCPQGPPGPPGPPGAP 166
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G PK P PG P P P P P P P PQGPP P
Sbjct: 180 GGDAPPGEAGPKGPPGPPGSPGA-PGEPGRPGDDAPSEPLIP---GEPGPQGPPGPP 232
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P PP P P P+ P GPP P
Sbjct: 126 GAPGLPG-NPGKPPVQPCEPITPP------PCKPCPDGPAGPPGPPGAP 167
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 613 GGXGXQXPPXXGXGXRXXXPXTPXXPPXKKKXXPXPPPQ--TXRXXPRGPP 759
G G Q PP G P PP P PPP T PR PP
Sbjct: 239 GRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPP 289
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
P P P P P P P PPP P P G P P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Score = 31.5 bits (68), Expect = 0.87
Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 PPNXXPXXKKPGXRXXXGXGXPKXPPXRAXGAGXXXXXXXXXXXXKKX---PPPXPPPKX 733
PP P + PG G P PP R G + PPP PP
Sbjct: 298 PPPPPPPGRTPGPPGMPGM-PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 734 XAXPPGAPPXPXS*P 778
A P PP P S P
Sbjct: 357 SAGPGMYPPPPPSRP 371
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 627 PKXPXXGPGX-PXXXPXNPXXPPXKKKXXPXTPPPN 731
P+ P GPG P P P PP P PPP+
Sbjct: 353 PRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPPS 388
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
P P P P P PP PPP+ P PP P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 303 GXAPXFPXXPPXXXPFXXGXPFXXXXXPPXXXGXPXXGGSXXP 175
G P P PP P G P PP G P GG P
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 336
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P PG P P + PP P PP P PP P
Sbjct: 305 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 671 GXXXRXPXPXXGGFWXPXPPP 609
G R P P G W P PPP
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPP 302
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXPXS*P 778
P P PPP PP PP P P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTP 285
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXPXS*P 778
P P PPP PP PP P P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTP 308
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXK--KKXXPXTPPPNXXPXPQGPPXXP 767
G G P P PG P P P K P P P P PQGPP P
Sbjct: 186 GVPGLPGPPGPSGPQGAPGVPGEK--GPTGEPGKVINGAPPGPPGPPGPPGPQGPPGPP 242
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 613 GGXGXQXPPXXGXGXRXXXPXTPXXPPXKKKXXPXPPPQ--TXRXXPRGPP 759
G G Q PP G P PP P PPP T PR PP
Sbjct: 249 GRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPP 299
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
P P P P P P P PPP P P G P P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Score = 31.5 bits (68), Expect = 0.87
Identities = 23/75 (30%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Frame = +2
Query: 563 PPNXXPXXKKPGXRXXXGXGXPKXPPXRAXGAGXXXXXXXXXXXXKKX---PPPXPPPKX 733
PP P + PG G P PP R G + PPP PP
Sbjct: 308 PPPPPPPGRTPGPPGMPGM-PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 734 XAXPPGAPPXPXS*P 778
A P PP P S P
Sbjct: 367 SAGPGMYPPPPPSRP 381
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 627 PKXPXXGPGX-PXXXPXNPXXPPXKKKXXPXTPPPN 731
P+ P GPG P P P PP P PPP+
Sbjct: 363 PRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPPS 398
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
P P P P P PP PPP+ P PP P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 303 GXAPXFPXXPPXXXPFXXGXPFXXXXXPPXXXGXPXXGGSXXP 175
G P P PP P G P PP G P GG P
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP 346
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P PG P P + PP P PP P PP P
Sbjct: 315 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 671 GXXXRXPXPXXGGFWXPXPPP 609
G R P P G W P PPP
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPP 312
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXPXS*P 778
P P PPP PP PP P P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTP 295
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXPXS*P 778
P P PPP PP PP P P
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTP 318
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +1
Query: 199 GGPXXXGGXXXXXKRXPPXKRG-XGXXXXWEXGGXPPQXXKTXGAGGXPXXP 351
GGP GG R PP RG G GG P Q +T A P P
Sbjct: 160 GGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQP 211
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +1
Query: 199 GGPXXXGGXXXXXKRXPPXKRG-XGXXXXWEXGGXPPQXXKTXGAGGXPXXP 351
GGP GG R PP RG G GG P Q +T A P P
Sbjct: 160 GGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPSPPGQP 211
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPN-XXPXPQGPP 758
G P+ PG P N PP P PPP P PQG P
Sbjct: 687 GQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIP 733
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXX--PXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P+ P G P P +P P + TP P+ P PQGP P
Sbjct: 164 GPAGPQGPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPSGAPGPQGPAGGP 216
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
P G P +P PP +K+ P PP P PP
Sbjct: 315 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 355
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 5/77 (6%)
Frame = +2
Query: 563 PPNXXPXXKKP--GXRXXXGXGXPKXPPXRAXGAGXXXXXXXXXXXXKKXPPPX---PPP 727
PP P P G G G P PP PPP PPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 728 KXXAXPPGAPPXPXS*P 778
PP PP S P
Sbjct: 292 PRAGSPPPPPPPRGSPP 308
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 489 PPXPXVGXTPXPRVGWVP 436
PP P G P PR G P
Sbjct: 256 PPPPAAGSPPPPRTGSPP 273
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = -3
Query: 336 PPGXXGFXXLGGXAPXFPXXPPXXXPFXXGXPFXXXXXPPXXXGXPXXGGSXXP 175
P G GG P P P G P PP G P G+ P
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
P G P +P PP +K+ P PP P PP
Sbjct: 336 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 376
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 5/77 (6%)
Frame = +2
Query: 563 PPNXXPXXKKP--GXRXXXGXGXPKXPPXRAXGAGXXXXXXXXXXXXKKXPPPX---PPP 727
PP P P G G G P PP PPP PPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 728 KXXAXPPGAPPXPXS*P 778
PP PP S P
Sbjct: 313 PRAGSPPPPPPPRGSPP 329
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 489 PPXPXVGXTPXPRVGWVP 436
PP P G P PR G P
Sbjct: 277 PPPPAAGSPPPPRTGSPP 294
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = -3
Query: 336 PPGXXGFXXLGGXAPXFPXXPPXXXPFXXGXPFXXXXXPPXXXGXPXXGGSXXP 175
P G GG P P P G P PP G P G+ P
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
P G P +P PP +K+ P PP P PP
Sbjct: 321 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 361
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 5/77 (6%)
Frame = +2
Query: 563 PPNXXPXXKKP--GXRXXXGXGXPKXPPXRAXGAGXXXXXXXXXXXXKKXPPPX---PPP 727
PP P P G G G P PP PPP PPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 728 KXXAXPPGAPPXPXS*P 778
PP PP S P
Sbjct: 298 PRAGSPPPPPPPRGSPP 314
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 489 PPXPXVGXTPXPRVGWVP 436
PP P G P PR G P
Sbjct: 262 PPPPAAGSPPPPRTGSPP 279
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = -3
Query: 336 PPGXXGFXXLGGXAPXFPXXPPXXXPFXXGXPFXXXXXPPXXXGXPXXGGSXXP 175
P G GG P P P G P PP G P G+ P
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.87
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PPP PP PP P
Sbjct: 577 PPPPPPPPMLGGPPPPPPPP 596
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXX--PXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P G P P NP P + P P+ P QGPP P
Sbjct: 169 GPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGSQGPPGAP 221
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P P PG P P P + P P P PQG P P
Sbjct: 178 GQPGAPGNKGPSGPNGNPGAPGA-PGQPGQDAPSEPITPGAPGPAGPAGPQGQPGAP 233
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 698 KKXPPPXPPPKXXAXPPGAPPXP 766
++ PPP PPP PP PP P
Sbjct: 130 QQPPPPPPPPHYPPPPPHYPPPP 152
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PPP PP PP P
Sbjct: 63 PPPPPPPPPPMCPPPPPPMP 82
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +3
Query: 627 PKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPP-PNXXPXPQGPPXXPXL 773
P P P P P P PP P PP P P P PP P +
Sbjct: 33 PPPPMCAP-PPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPM 81
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXPXS*P 778
PPP PP+ PP PP P P
Sbjct: 47 PPPICPPQFCPPPPMCPPPPPPPP 70
Score = 27.1 bits (57), Expect(2) = 3.5
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 636 PXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
P P P P PP PPP P P PP P
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 26.2 bits (55), Expect(2) = 5.8
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 648 PGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
P P P PP P PP P P PP P
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
Score = 21.0 bits (42), Expect(2) = 5.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 870 PAPPPQXXPPXXXP 911
P PPP PP P
Sbjct: 63 PPPPPPPPPPMCPP 76
Score = 21.0 bits (42), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 870 PAPPPQXXPPXXXP 911
P PPP PP P
Sbjct: 67 PPPPPPMCPPPPPP 80
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXX--PXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P+ P G P P +P P + TP P P PQGP P
Sbjct: 164 GPAGPQGPAGDAGAPGQAGAPGHPGAPGQGGQRSRGTPGPAGAPGPQGPAGGP 216
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 645 GPGXPXXXPXNPXXP-PXKKKXXPXTPPPNXXPXPQGPP 758
GP P P P P P P P P P P GPP
Sbjct: 171 GPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPP 209
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -3
Query: 333 PGXXGFXXLGGXAPXFPXXPPXXXPFXXGXPFXXXXXPPXXXGXPXXGGSXXP 175
PG G G AP P PP P G P PP G P G P
Sbjct: 140 PGNPGASGKGAAAPCEPSTPPPCQPCPAGPP-----GPPGPDGTPGEPGGPGP 187
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 627 PKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
P+ P P P PP ++ P TPP P P+ PP P
Sbjct: 144 PRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP---SPEPRNPPRTP 187
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +2
Query: 626 PKXPPXRAXGAGXXXXXXXXXXXXKKXPPP-XPPPKXXAXPPGAPPXPXS*P 778
P PP R AG + PPP PPP+ PP PP P P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPR---RPPMTPPSPQRRP 171
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -2
Query: 757 GGPWGXGXXFGGGVWGXXFFXXGGXXGFXGXXXGXPGPXXG 635
GG WG G GGG WG GG G G G G G
Sbjct: 54 GGGWGRGGGRGGGDWGGN-NGGGGNWGGNGGGRGDWGGNGG 93
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 754 GPWGXGXXFGGGVWGXXFFXXGGXXGFXGXXXGXPG 647
G WG GGG WG GG G G G G
Sbjct: 102 GDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRG 137
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 621 GXPKXPXXG--PGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P PG P P P P TPPP P PQGPP P
Sbjct: 104 GRPGRPGAAGLPGNPGRPPAQP--------CDPITPPP-CRPCPQGPPGAP 145
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 648 PGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
PG P P +P PP + P P PQG P
Sbjct: 118 PGRPPAQPCDPITPPPCRPCPQGPPGAPGSPGPQGDAGAP 157
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -2
Query: 754 GPWGXGXXFGGGVWGXXFFXXGGXXGFXGXXXGXPGPXXGXFGXPXPXXLXXP 596
G G G GGG G + GG GF P P G P P P
Sbjct: 117 GGGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPPPAPSFSHAP 169
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P PG P P +P P + P P+ P PQGP P
Sbjct: 171 GGPGPAGPTGPTGDAGAPGQPGH-PGSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGP 226
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 648 PGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
PG P P +P PP P P P P QGPP
Sbjct: 127 PGRPPQAPCDPITPP------PCKPCPQGPPGVQGPP 157
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PP A PP AP P
Sbjct: 249 PPPPPPTTTTAPPPAAPEQP 268
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGP 755
G P P G P P P P ++ P P P P P GP
Sbjct: 186 GPPGPAGPAGNDGAPGA-PGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PP A PP PP P
Sbjct: 797 PPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PP A PP PP P
Sbjct: 797 PPPLPPISSGAPPPPPPPPP 816
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGP 755
G P P G P P P P ++ P P P P P GP
Sbjct: 186 GPPGPAGPAGNDGAPGA-PGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PP A PP AP P
Sbjct: 249 PPPPPPTTTTAPPPAAPEQP 268
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGP 755
G P P G P P P P ++ P P P P P GP
Sbjct: 186 GPPGPAGPAGNDGAPGA-PGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +3
Query: 615 GXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGP 755
G P P G P P P P ++ P P P P P GP
Sbjct: 186 GPPGPAGPAGNDGAPGA-PGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 610 GGGXGXQXPPXXGXGXRXXXPXTPXXPPXKKKXXP 714
GGG G P G G P P PP K + P
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 687 PPXKKKXXPXTPPPNXXPXPQGPP 758
PP ++ P PPP P P+ PP
Sbjct: 1418 PPQLQREPPAPPPPQMIPLPKDPP 1441
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 610 GGGXGXQXPPXXGXGXRXXXPXTPXXPPXKKKXXP 714
GGG G P G G P P PP K + P
Sbjct: 622 GGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +3
Query: 591 NXGXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
N G G P+ P PG P P P + P + P P GPP P
Sbjct: 162 NPGRNGEDGAPGPQGPSGPPGPPGQ-PGQPGQRGPPGEPGALLPGGDAPPGPSGPPGRP 219
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 687 PPXKKKXXPXTPPPNXXPXPQGPP 758
PP ++ P PPP P P+ PP
Sbjct: 1418 PPQLQREPPAPPPPQMIPLPKDPP 1441
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 701 KXPPPXPPPKXXAXPPGAPPXPXS*P 778
K PPP PP A P PP P P
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPPPP 512
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPX---TPPPNXXPXPQGPPXXP 767
G P P PG P P NP P K P TPPP P P GPP P
Sbjct: 115 GNPGKPGK-PGKPGA-PGNPGAP-GKGAAVPCEAKTPPP-CKPCPAGPPGPP 162
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXX--PXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P+ P G P P NP + P P+ P PQGP P
Sbjct: 162 GQGGSQGPAGPRGPAGDAGAPGQVGAPGNPGQAGRGGQRSHGLPGPSGAPGPQGPSGAP 220
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 645 GPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQG 752
GP P P P P + P PP P P G
Sbjct: 806 GPRPPYPYPGGPVPPGPPQNRMPPPPPAQGAPSPSG 841
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +3
Query: 627 PKXPXXGP-GXPXXXPXNPXXPPXKKKXXPXTP---PPNXXPXPQGPPXXP 767
P+ P P P P P PP + P P PP P P PP P
Sbjct: 37 PRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPP 87
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 627 PKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGP 755
P P P P P PP P PPP P P P
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCP 94
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 701 KXPPPXPPPKXXAXPPGAPPXPXS*P 778
K PPP PP A P PP P P
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPP 519
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PP A PP PP P
Sbjct: 236 PPPLPPVGAGAPPPPPPPPP 255
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 701 KXPPPXPPPKXXAXPPGAPPXPXS*P 778
K PP PPPK PP P P P
Sbjct: 88 KPTPPPPPPKPTIRPPPIPASPPPRP 113
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 701 KXPPPXPPPKXXAXPPGAPPXPXS*P 778
K PP PPPK PP P P P
Sbjct: 310 KPTPPPPPPKPTIRPPPIPASPPPRP 335
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTP--PPNXXPXPQGPPXXPXLN 776
G P PG P P P PP P P P + P PQGPP P ++
Sbjct: 243 GVPGQVIEVPGTPG--PAGPPGPPGPI-GPPGQPGAPGSSQPGPQGPPGDPGID 293
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G G P P PG P NP P + P TP P P GPP
Sbjct: 205 GGEGPAGPPGPPGPAGNPGTDGA-PGNPGAP-GQVTETPGTPGPAGAAGPPGPP 256
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P PG P P +P P + TP + P PQGP P
Sbjct: 164 GGRGPPGPRGPAGDAGSPGQPGH-PGSPGNPGRGGQRSRGTPGASGRPGPQGPAGAP 219
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXP 746
G P P G P PP P PPPN P P
Sbjct: 1571 GGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPP 1612
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PP A PP PP P
Sbjct: 222 PPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXP 766
PPP PP A PP PP P
Sbjct: 222 PPPLPPVGAGAPPPPPPPPP 241
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXP-PXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P+ P PG N P P + P P P P P GP P
Sbjct: 212 GIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPP 269
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +3
Query: 597 GXXXXXGXGXPKXPXXGPGXPXXXPXNPXXP-PXKKKXXPXTPPPNXXPXPQGPPXXP 767
G G P+ P PG N P P + P P P P P GP P
Sbjct: 212 GIKGPPGPPGPRGPKGPPGSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPFGPP 269
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXPXS 772
PPP PPP PP A P S
Sbjct: 4 PPPPPPPPPPPPPPAASAPPPS 25
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXPXS 772
PPP PPP PP A P S
Sbjct: 4 PPPPPPPPPPPPPPAASAPPPS 25
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G P P G P P PP + + P PPP PP
Sbjct: 691 GGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPP 736
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 5/54 (9%)
Frame = +3
Query: 621 GXPKXPXXG-----PGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPPXXP 767
G P P G PG P P +P PP + P P PQG P
Sbjct: 125 GRPGRPGAGGLPGNPGRPPAQPCHPITPPPCRPCPQGPPGAPGSPGPQGNAGAP 178
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G P P G P P PP + + P PPP PP
Sbjct: 691 GGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGYPP 736
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTPPPNXXPXPQGPP 758
G P P PG P P P + P TP P P P GPP
Sbjct: 115 GAPGRPG-APGAPGF-PGRPPAVCEEITEPPCTPCPPGEPGPPGPP 158
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 707 PPPXPPPKXXAXPPGAPPXPXS 772
PPP PPP P PP P S
Sbjct: 476 PPPPPPPPPENEPEEFPPPPPS 497
>Z75549-6|CAC42343.1| 74|Caenorhabditis elegans Hypothetical
protein T19C4.7 protein.
Length = 74
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -2
Query: 757 GGPWGX-GXXFGGGVWGXXFFXXGGXXGFXGXXXGXPGPXXGXFGXP 620
GGP+G G +GGG WG + G G G GP G G P
Sbjct: 26 GGPYGGYGGGYGGGPWG---YGGGWRRRHWGGYGG--GPWGGYGGGP 67
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +3
Query: 621 GXPKXPXXGPGXPXXXPXNPXXPPXKKKXXPXTP-PPN--XXPXPQGPPXXP 767
G P P PG P P P PP P P P P +GPP P
Sbjct: 122 GAPGAPGH-PGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPP 172
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 710 PPXPPPKXXAXPPGAPPXP 766
PP PPP PP PP P
Sbjct: 147 PPRPPPPVELSPPPRPPPP 165
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 710 PPXPPPKXXAXPPGAPPXP 766
PP PPP PP PP P
Sbjct: 788 PPRPPPPVELSPPPRPPPP 806
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 710 PPXPPPKXXAXPPGAPPXP 766
PP PPP PP PP P
Sbjct: 788 PPRPPPPVELSPPPRPPPP 806
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 710 PPXPPPKXXAXPPGAPPXP 766
PP PPP PP PP P
Sbjct: 788 PPRPPPPVELSPPPRPPPP 806
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.151 0.545
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,153,346
Number of Sequences: 27780
Number of extensions: 218460
Number of successful extensions: 2541
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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