Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_K05
         (835 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    33   0.25 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   5.4  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   5.4  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   5.4  

>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +3

Query: 567 FWXPPWGXXKXGAPPGKXXXPPRXXXXXPXPKKXGXPP 680
           F  PP G  + G P G    PP      P P+  G PP
Sbjct: 331 FGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPP 368


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/78 (26%), Positives = 21/78 (26%)
 Frame = -1

Query: 688 PXXGGXPXFLGXGXXXXXRGGXXXFPGGAPXXXXPQGGXQKIFXPPXXXXXXXXXXXXXX 509
           P   G P   G        GG     GG P    P GG   I   P              
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772

Query: 508 XGPXXGGEXGXKKXAPPP 455
             P  GG  G     PPP
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/78 (26%), Positives = 21/78 (26%)
 Frame = -1

Query: 688 PXXGGXPXFLGXGXXXXXRGGXXXFPGGAPXXXXPQGGXQKIFXPPXXXXXXXXXXXXXX 509
           P   G P   G        GG     GG P    P GG   I   P              
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772

Query: 508 XGPXXGGEXGXKKXAPPP 455
             P  GG  G     PPP
Sbjct: 773 PPPPPGGFKGGPPPPPPP 790


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/78 (26%), Positives = 21/78 (26%)
 Frame = -1

Query: 688 PXXGGXPXFLGXGXXXXXRGGXXXFPGGAPXXXXPQGGXQKIFXPPXXXXXXXXXXXXXX 509
           P   G P   G        GG     GG P    P GG   I   P              
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGG-PPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355

Query: 508 XGPXXGGEXGXKKXAPPP 455
             P  GG  G     PPP
Sbjct: 356 PPPPPGGFKGGPPPPPPP 373


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,688,791
Number of Sequences: 27780
Number of extensions: 214907
Number of successful extensions: 309
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)