Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_K02
         (865 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071155-1|AAL48777.1|  100|Drosophila melanogaster RE18615p pro...    70   5e-12
AJ249754-1|CAB56698.1|  100|Drosophila melanogaster sec61beta pr...    70   5e-12
AE013599-1924|AAF58229.1|  100|Drosophila melanogaster CG10130-P...    70   5e-12

>AY071155-1|AAL48777.1|  100|Drosophila melanogaster RE18615p
           protein.
          Length = 100

 Score = 69.7 bits (163), Expect = 5e-12
 Identities = 31/46 (67%), Positives = 33/46 (71%)
 Frame = +3

Query: 312 GSGGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 449
           G+GGMWRFYTDDS            MSLLFIASVFMLHIWGKY R+
Sbjct: 55  GTGGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100



 Score = 37.1 bits (82), Expect = 0.031
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +2

Query: 158 MPQSPSATSVGSGSRSPTKASAGPRTA 238
           MP   S+TSVGSGSRSP+K SA PR+A
Sbjct: 1   MPAPASSTSVGSGSRSPSKLSA-PRSA 26


>AJ249754-1|CAB56698.1|  100|Drosophila melanogaster sec61beta
           protein protein.
          Length = 100

 Score = 69.7 bits (163), Expect = 5e-12
 Identities = 31/46 (67%), Positives = 33/46 (71%)
 Frame = +3

Query: 312 GSGGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 449
           G+GGMWRFYTDDS            MSLLFIASVFMLHIWGKY R+
Sbjct: 55  GTGGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100



 Score = 37.1 bits (82), Expect = 0.031
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +2

Query: 158 MPQSPSATSVGSGSRSPTKASAGPRTA 238
           MP   S+TSVGSGSRSP+K SA PR+A
Sbjct: 1   MPAPASSTSVGSGSRSPSKLSA-PRSA 26


>AE013599-1924|AAF58229.1|  100|Drosophila melanogaster CG10130-PA
           protein.
          Length = 100

 Score = 69.7 bits (163), Expect = 5e-12
 Identities = 31/46 (67%), Positives = 33/46 (71%)
 Frame = +3

Query: 312 GSGGMWRFYTDDSXXXXXXXXXXXXMSLLFIASVFMLHIWGKYTRA 449
           G+GGMWRFYTDDS            MSLLFIASVFMLHIWGKY R+
Sbjct: 55  GTGGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNRS 100



 Score = 37.1 bits (82), Expect = 0.031
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +2

Query: 158 MPQSPSATSVGSGSRSPTKASAGPRTA 238
           MP   S+TSVGSGSRSP+K SA PR+A
Sbjct: 1   MPAPASSTSVGSGSRSPSKLSA-PRSA 26


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,296,860
Number of Sequences: 53049
Number of extensions: 445472
Number of successful extensions: 943
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)