Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_J24
(887 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 117 1e-26
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 44 2e-04
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 40 0.002
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 40 0.003
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 39 0.005
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 37 0.019
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 33 0.40
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 31 1.6
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 29 4.9
10_03_0023 - 7151465-7152111,7152222-7152405 29 6.5
12_02_1174 - 26696869-26698191 28 8.6
11_01_0385 + 2915532-2916482 28 8.6
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 117 bits (282), Expect = 1e-26
Identities = 51/103 (49%), Positives = 67/103 (65%)
Frame = +2
Query: 233 NYAPLPVALCRGEGVFVWDVXGKKYYDFLSPYSAVNQGHCHPRIIEAXKKQADNLTLVSR 412
NY P+PV +GEG + D G KY DFLS YSAVNQGHCHP+++ A K+QA+ LTL SR
Sbjct: 53 NYHPIPVVFSKGEGSHILDPEGNKYIDFLSAYSAVNQGHCHPKVLRALKEQAERLTLSSR 112
Query: 413 AFXSDPLGKYXKYMTXLFGYDRLLPMXXGVEXR*QCCXIARXW 541
AF +D + +Y+T +FGY+ +LPM G E + R W
Sbjct: 113 AFYNDKFPIFAEYLTSMFGYEMMLPMNTGAEGVETAIKLVRKW 155
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +2
Query: 236 YAPLPVALCRGEGVFVWDVXGKKYYDFLSPYSAVNQGHCHPRIIEAXKKQADNLTLVSRA 415
Y P+ + G+ +++D GK+Y D V+ GHCHP I+ A +Q L +
Sbjct: 84 YYQKPLNIVEGKMQYLYDENGKRYLDCFGGIVTVSCGHCHPDIVNAVVEQTKLLQHTTTI 143
Query: 416 FXSDPLGKY 442
+ + P+ ++
Sbjct: 144 YLNQPIVEF 152
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 248 PVALCRGEGVFVWDVXGKKYYDFLSPYSAVNQGHCHPRIIEAXKKQADNL 397
P+ + R EG +V+D+ GKKY D L+ + G PR+I+A Q + L
Sbjct: 122 PLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLNKL 171
>04_04_1143 +
31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 248 PVALCRGEGVFVWDVXGKKYYDFLSPYSAVNQGHCHPRIIEAXKKQADNL 397
P+ + R EG +V+D+ GKKY D L+ G PR+++A +Q L
Sbjct: 511 PLVIERSEGSYVYDIDGKKYLDSLAGLWCTALGGSEPRLVKAATEQLHKL 560
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 272 GVFVWDVXGKKYYDFLSPYSAVNQGHCHPRIIEAXKKQADNL 397
G +V+D G KY D L+ G PR+++A Q + L
Sbjct: 57 GSYVYDSKGNKYLDTLAGLWCTALGGSEPRLVKAATDQLNKL 98
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 39.1 bits (87), Expect = 0.005
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 248 PVALCRGEGVFVWDVXGKKYYDFLSPYSAVNQGHCHPRIIEAXKKQADNL 397
P+ + G+ +++D G++Y D + + V GHCHP ++ A QA L
Sbjct: 64 PLNIVEGKMQYLFDERGRRYLDAFAGIATVCCGHCHPDVVGAIAAQAGRL 113
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 37.1 bits (82), Expect = 0.019
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 278 FVWDVXGKKYYDFLSPYSAVNQGHCHPRIIEAXKKQADNL 397
+++D G++Y D + V GHCHP ++EA QA +
Sbjct: 99 YLFDEDGRRYLDAFGGIATVCCGHCHPDVVEAMVNQAKRI 138
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 32.7 bits (71), Expect = 0.40
Identities = 24/95 (25%), Positives = 34/95 (35%)
Frame = +2
Query: 251 VALCRGEGVFVWDVXGKKYYDFLSPYSAVNQGHCHPRIIEAXKKQADNLTLVSRAFXSDP 430
V L G G ++D G++Y D + + GH P + A QA L S + P
Sbjct: 83 VVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVHASNVQYTVP 142
Query: 431 LGKYXKYMTXLFGYDRLLPMXXGVEXR*QCCXIAR 535
K + DR+ G E AR
Sbjct: 143 QVALAKRLVEASFADRVFFANTGTEANEAAIKFAR 177
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +2
Query: 251 VALCRGEGVFVWDVXGKKYYDFLSPYSAVNQGHCHPRIIEAXKKQADNLTLVSRAFXSDP 430
V L G G ++D G++Y D + + GH P + A QA L S + P
Sbjct: 87 VVLVAGRGCKLYDADGREYLDMAAGIAVNALGHADPDWVAAVSAQAATLVHASNVQYTVP 146
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +1
Query: 739 PXAXQESXPPXGXPWVEPXSXEXPAXPXXPRXXAYPHPTXXXXPXPXPP 885
P ++ PP VEP + P P+ P P P P PP
Sbjct: 196 PKEEEKPEPPPAVIIVEPPAPAPEPEPEPPKKEPPPPPPPKQEPCPPPP 244
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/75 (29%), Positives = 25/75 (33%)
Frame = +2
Query: 605 PSWXGXPXSAGXXIIXTPXAXXXFGPXMAGPSLXXPLTXTPPXXXQXLXKNPNRXXXYXG 784
P+ G P P P + PS+ PLT PP P
Sbjct: 180 PNIGGVPIPPNPITPAPPSLVPPVFPTPSPPSILPPLTPQPPPSSLIPPVLPLPL----- 234
Query: 785 LNPXPXXPPPVRXLP 829
LNP P PPP LP
Sbjct: 235 LNPPPPPPPPPSLLP 249
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 763 PPXGXPWVEPXSXEXPAXPXXPRXXAYPHPTXXXXPXPXPP 885
PP VEP P P P P P P P PP
Sbjct: 128 PPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPP 168
>11_01_0385 + 2915532-2916482
Length = 316
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +1
Query: 757 SXPPXGXPWVEPXSXEXPAXPXX---PRXXAYPHPTXXXXPXPXPP 885
S PP W +P + P P P A+PHP P P P
Sbjct: 230 SHPPPTPAWPQPGNKWPPLPPFPSHPPPTPAWPHPGNQWPPLPPFP 275
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,105,950
Number of Sequences: 37544
Number of extensions: 340076
Number of successful extensions: 1004
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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