Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_J22
         (862 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha...    27   3.4  
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe...    27   3.4  
SPAC607.04 |||inositol polyphosphate kinase |Schizosaccharomyces...    27   3.4  
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B...    27   4.5  

>SPAC23E2.03c |ste7||meiotic suppressor protein
           Ste7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 569

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 174 CFSTNASVNPVSF*IQVR 121
           CF TNA+ +P SF IQ+R
Sbjct: 23  CFETNAATSPRSFQIQLR 40


>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 488

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = -1

Query: 337 GKESDLVHHHEIFVGFHVCVAVLAGLDVEVLGDFVVLSFIADLVNVVE-KRQNLLLLFDE 161
           G  S  +HHH++ +  H  +  L G   EV G    L++ +D + +      N++ ++D 
Sbjct: 279 GSRSGAIHHHDVRIANHQ-IGTLQGHSSEVCG----LAWRSDGLQLASGGNDNVVQIWDA 333

Query: 160 RERQPGVVLNSGTVLLRARAISP 92
           R   P     +    ++A A  P
Sbjct: 334 RSSIPKFTKTNHNAAVKAVAWCP 356


>SPAC607.04 |||inositol polyphosphate kinase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 268

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 256 VEVLGDFVVLSFIADLVNVVEKRQNLLLLFDERERQPGVVLNSGTVL 116
           VE L DF V   ++    +VE   NLL LF+    +  + L S ++L
Sbjct: 165 VEGLNDFFVSCSLSQKARLVESFLNLLKLFEVDLSESYIELKSSSIL 211


>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
           Brl1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 692

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 764 LNAYYYYFHSHLPFWWNSGKYGAFK 838
           LN Y  YF +H P      K+G+FK
Sbjct: 119 LNKYASYFQAHEPTLQKLAKFGSFK 143


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,215,263
Number of Sequences: 5004
Number of extensions: 64375
Number of successful extensions: 206
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)