Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_J21
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0105 - 4337047-4337079,4337175-4337242,4337323-4337425,433...   139   2e-33
08_02_1361 - 26398987-26399019,26399320-26399387,26399458-263995...   127   1e-29
02_01_0333 + 2370032-2371075                                           28   8.1  

>09_02_0105 -
           4337047-4337079,4337175-4337242,4337323-4337425,
           4337507-4337737,4339307-4339347,4339437-4339473,
           4339603-4339605
          Length = 171

 Score =  139 bits (337), Expect = 2e-33
 Identities = 80/163 (49%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
 Frame = +1

Query: 82  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 261
           M +YSRE +NP KS KA G +LRVHFKNT ETA AIRK+PL +A RYL++VI  K+ IPF
Sbjct: 1   MVKYSREANNPTKSSKAMGRDLRVHFKNTRETAFAIRKLPLGKAKRYLEDVIAHKQAIPF 60

Query: 262 RRFNGGVGRCAQAK-QFGTTQGRWPKKSAEFLLAVIE--ER*IKC*QQNFGR*QASHRPH 432
           RR+ GGVGR AQAK +    QGRWP KSA F+L +++  E   +    +      SH   
Sbjct: 61  RRYCGGVGRTAQAKSRHSNGQGRWPAKSARFILDLLKNAESNAEVKGLDVDTLYVSH-IQ 119

Query: 433 SGKSRALPTQTYIPCSRVASXPYMSSPXHIEVCLSEREDAVAR 561
             +++    +TY    R+   PYMSSP HIE+ LSE+E+ V +
Sbjct: 120 VNQAQKQRRRTYRAHGRI--NPYMSSPCHIELILSEKEEPVKK 160


>08_02_1361 -
           26398987-26399019,26399320-26399387,26399458-26399560,
           26399658-26399888,26400791-26400826,26400891-26400931,
           26401028-26401064,26401158-26401160
          Length = 183

 Score =  127 bits (307), Expect = 1e-29
 Identities = 79/175 (45%), Positives = 104/175 (59%), Gaps = 15/175 (8%)
 Frame = +1

Query: 82  MGRYSREPDNPAKSCKARGSNLRVHFK------------NTYETAMAIRKMPLRRAVRYL 225
           MG+YS EP NP KS KA G +LRVHFK            NT ETA A+RK+PL +A RYL
Sbjct: 1   MGKYSTEPSNPTKSAKAMGRDLRVHFKVIVFARFVQCCSNTRETAFALRKLPLVKAKRYL 60

Query: 226 KNVIEKKECIPFRRFNGGVGRCAQAK-QFGTTQGRWPKKSAEFLLAVIE--ER*IKC*QQ 396
           ++VI  K+ IPFRR+ GGVGR AQ K +    QGRWP KSA F+L +++  E        
Sbjct: 61  EDVIAHKQAIPFRRYCGGVGRTAQVKSRQSNGQGRWPAKSARFILDLLKNAESNADVKGL 120

Query: 397 NFGR*QASHRPHSGKSRALPTQTYIPCSRVASXPYMSSPXHIEVCLSEREDAVAR 561
           +      SH     +++    +TY    R+   PYMSSP H+E+ LSE+E+AV +
Sbjct: 121 DVDNLFVSH-IQVNQAQKQRRRTYRAHGRI--NPYMSSPCHVELILSEKEEAVKK 172



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = +2

Query: 362 LLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHG 484
           LL+NAESNAD K LDVD L + HIQVN+A   RRRTYRAHG
Sbjct: 107 LLKNAESNADVKGLDVDNLFVSHIQVNQAQKQRRRTYRAHG 147


>02_01_0333 + 2370032-2371075
          Length = 347

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +2

Query: 398 TLDVDRLVIDHIQVNRAPCLRRRTYRAHGSHQXPTCRLP 514
           T+  D  ++DH++V   PC     Y    +     C LP
Sbjct: 123 TVGDDLYILDHVEVGNVPCFHGLIYEDRLNEDWCCCALP 161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,252,171
Number of Sequences: 37544
Number of extensions: 407039
Number of successful extensions: 996
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)