Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_J15
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248...    40   0.002
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817...    39   0.005
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554...    39   0.006
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392...    38   0.011
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704...    29   3.8  
03_06_0579 + 34870958-34874578                                         28   8.7  

>01_06_1654 -
           38924090-38924101,38924183-38924215,38924737-38924829,
           38924909-38924965,38925048-38925143,38925237-38925304,
           38925429-38925486,38925572-38925658,38925935-38925982,
           38926060-38926116,38926200-38926458,38926666-38926858,
           38926991-38927098,38927849-38927957
          Length = 425

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +2

Query: 155 DVFFEEKFPDDSWESXWVYSEHPGKE--FGKFKLTAGKFFSEP 277
           +V FEE+F +D WES WV S+    E   G FK TAG++  +P
Sbjct: 28  EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP 69


>07_01_0971 +
           8169197-8169311,8170351-8170458,8170533-8170725,
           8170811-8171069,8171151-8171207,8171433-8171480,
           8171571-8171657,8171743-8171800,8171891-8171958,
           8172066-8172161,8172244-8172291,8172658-8172696,
           8172782-8172868,8173136-8173147
          Length = 424

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = +2

Query: 155 DVFFEEKFPDDSWESXWVYSEHPGKE--FGKFKLTAGKFFSEP 277
           +VFF+EKF +D WES WV SE    E   G++  T+GK+  +P
Sbjct: 30  EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDP 71


>05_06_0014 +
           24854462-24854570,24854958-24855065,24855240-24855432,
           24855892-24856150,24856236-24856292,24856370-24856417,
           24856725-24856811,24856885-24856942,24857084-24857151,
           24857279-24857374,24857483-24857539,24857906-24857952,
           24858184-24858210,24858312-24858504
          Length = 468

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +2

Query: 146 INCDVFFEEKFPDDSWESXWVYSEHPGKE--FGKFKLTAGKFFSEP 277
           ++ +V FEE+F DD W S WV S+    E   G FK TAG +  +P
Sbjct: 25  VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP 69


>03_06_0563 -
           34738732-34738890,34738965-34739009,34739154-34739201,
           34739291-34739386,34739467-34739534,34739633-34739690,
           34739783-34739869,34740004-34740051,34740360-34740416,
           34740525-34740783,34740877-34741102,34741168-34741275,
           34741885-34741987
          Length = 453

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = +2

Query: 155 DVFFEEKFPDDSWESXWVYSE--HPGKEFGKFKLTAGKFFSE 274
           +VFF+EKF DD WE  WV SE        G++  T+GK++ +
Sbjct: 26  EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGD 66


>12_02_0118 -
           13869237-13869307,13869375-13869465,13870321-13870440,
           13870668-13870795,13871159-13871270,13871719-13871817,
           13871918-13871992,13872099-13872320,13873177-13874034
          Length = 591

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 21/54 (38%), Positives = 22/54 (40%)
 Frame = +1

Query: 457 NLGPXRAXPXXKPPIXIXXPXPXXFWAREXQKXPPFXXLFXG*XPPPPKKXXPP 618
           NL   RA P   PP     P P     R  Q  PP    F G  PPPP +  PP
Sbjct: 33  NLHVSRAPPPFAPPGG-NGPVPSSI--RAPQAPPPGARPFPG-SPPPPSQPPPP 82


>03_06_0579 + 34870958-34874578
          Length = 1206

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -3

Query: 206 PNXFPTNHQETSPQRIHHNLSKIMPAS*QRPVQQLSFSIHKYHLLQQKTGHGIKILRNSL 27
           P+  P N++    QR H     I  A+     +  S  +  +HL ++ T  G K+L N L
Sbjct: 720 PSGIPLNYEMFVTQRTHAIQQSIRQATNDPRFENTSALVENHHLCRRNT-EGEKVLPNGL 778


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,158,594
Number of Sequences: 37544
Number of extensions: 287690
Number of successful extensions: 556
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)