Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_J12
(1132 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 1e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.003
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.010
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.073
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.17
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.17
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.39
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 1.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 1.2
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 6.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 6.4
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/56 (39%), Positives = 22/56 (39%)
Frame = +1
Query: 664 PPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXAP 831
PP PPP PP P G P P P P G P P P APP AP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPS--TAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 35.5 bits (78), Expect = 0.014
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXAP 831
P PP P P PP G P P P P G P P P PP P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPP-VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 34.3 bits (75), Expect = 0.032
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 11/71 (15%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPPPPAXXRG---XPXXAPAXXFXXPRXPXGGGGXPXP--------PX 798
P PP P P + PP P G P PA P P G P P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 799 PXRCAPPXXAP 831
P APP P
Sbjct: 1097 PSVAAPPVPKP 1107
Score = 34.3 bits (75), Expect = 0.032
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 664 PPXPPPX-AXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXAP 831
PP P P A PP PA P P+ P P G P P P APP AP
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPS--VAAPPVPVPSGAPPV-PKPSVAAPPVPAP 1155
Score = 33.9 bits (74), Expect = 0.042
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = +1
Query: 652 PPPXPPXPPPX-AXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXA 828
P PP P P A PP P P P+ P P G P P P APP A
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPS--VAAPPVPAPSGAPPV-PKPSVAAPPVPA 1173
Query: 829 P 831
P
Sbjct: 1174 P 1174
Score = 33.1 bits (72), Expect = 0.073
Identities = 21/63 (33%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = +1
Query: 646 GXPPPXPPXPPPXAX-PPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPX 822
G P PP P P + P PA P AP+ P P P P P PP
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPS---GIPPVPKPSVAAPPVPKPSVAVPPV 1114
Query: 823 XAP 831
AP
Sbjct: 1115 PAP 1117
Score = 30.7 bits (66), Expect = 0.39
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 664 PPXPPPXAXPPP-PAXXRGXPXXAPAXXFXXPRXPXGGGGXPXP-PXPXRCAPPXXAP 831
PP P P A PP P P P P+ G P P P P P AP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Score = 30.3 bits (65), Expect = 0.52
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +1
Query: 664 PPXPPPXAX-PPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXAP 831
PP P P + PP P G P P P P G P P P APP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPS--EAPPVPKPSVGVP-PVPPPSTAPPVPTP 1222
Score = 29.9 bits (64), Expect = 0.68
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +1
Query: 652 PPPXPPXPPP-XAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXA 828
P PP P P A PP PA G P P P P P P P PP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIP-PVPKPAAGVPPVPPPSEAPPV-PKPSVGVPPVPP 1212
Query: 829 P 831
P
Sbjct: 1213 P 1213
Score = 28.7 bits (61), Expect = 1.6
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +1
Query: 652 PPPX--PPXPPPXAXPPP-PAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPX 822
PPP PP P P PP P P P+ P P P P P AP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL--PPVPVPTAKAPPVPAPSSEAPSV 1249
Query: 823 XAP 831
P
Sbjct: 1250 STP 1252
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 664 PPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXAP 831
PP P P + PP PA P P G P P P APP P
Sbjct: 1150 PPVPAP-SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE-APPVPKP 1203
Score = 26.6 bits (56), Expect = 6.4
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +1
Query: 664 PPXP-PPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXAP 831
PP P P A P P P AP+ P P P P P PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPS---GAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXAP 831
PP PP PP A P P P P+ P P G P P PP AP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP-LPAGMPAAPPLPPAAPAPPPAPAP 482
Query: 832 XP 837
P
Sbjct: 483 AP 484
Score = 36.3 bits (80), Expect = 0.008
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +1
Query: 652 PPPXPPXPPPXAX-PPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXA 828
PP PP PP PP+ G P P P G PP P P A
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 829 PXP 837
P P
Sbjct: 480 PAP 482
Score = 32.7 bits (71), Expect = 0.097
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +2
Query: 653 PPPPPXRXXXXXXXXXXXXXXXXXXGPRPXXSXXPARPXGGGGXPXPPRXXAAPPP 820
PPPPP R P P P R G P PP+ +APPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPP-----PPRSNAAGSIPLPPQGRSAPPP 363
Score = 30.3 bits (65), Expect = 0.52
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +1
Query: 652 PPPXPPXPP---PXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAP 816
PP PP P P A P PP+ P PA P P P P P AP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPL--PAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.3 bits (60), Expect = 2.1
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXXAP 831
PPP PP P P R P P PR G P P R AP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPP------PRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 832 XP 837
P
Sbjct: 392 PP 393
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +1
Query: 289 PRGXGGXGXPPPXPPXXXAAXXXPPPPXRGGGXRXXPARXXGXPXPPXXP 438
P G PP ++ PPPP R P G PP P
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 316 PPPXPPXXXAAXXXPPPPXRGGGXRXXPAR 405
PPP PP AA P PP P R
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = -3
Query: 830 GAXXGGAQRXGXGGXGXPPPPXGXRGXXXXXAGAXXGXPRXXAGGGGXAXGGGXGGXGGG 651
G GG G G G PP P G G GGG GG GG GGG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 36.7 bits (81), Expect = 0.006
Identities = 22/60 (36%), Positives = 22/60 (36%)
Frame = -3
Query: 830 GAXXGGAQRXGXGGXGXPPPPXGXRGXXXXXAGAXXGXPRXXAGGGGXAXGGGXGGXGGG 651
G G G GG G G G G G P GG G GGG GG GGG
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG-GFGGGLGGFGGG 257
Score = 33.5 bits (73), Expect = 0.055
Identities = 24/63 (38%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -3
Query: 836 GXGAXXG-GAQRXGXGGXGXPPPPXGXRGXXXXXAGAXXGXPRXXAGGGGXAXGGGXGGX 660
G G G G G GG G P G G G G GGG GGG GG
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGP--GGFEGGPGGFGGGPGGF-----GGGLGGFGGGPGGF 261
Query: 659 GGG 651
GGG
Sbjct: 262 GGG 264
Score = 30.7 bits (66), Expect = 0.39
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = -3
Query: 836 GXGAXXGGAQRXGXGGXGXPPPPXGXRGXXXXXAGAXXGXPRXXAGGGGXAXGGGXGGXG 657
G G GG G G G P G G G G GG G GGG GG G
Sbjct: 215 GEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF----GGGPG-GFGGGPGGHG 269
Query: 656 G 654
G
Sbjct: 270 G 270
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.010
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +1
Query: 691 PPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXP--XRCAPPXXAPXP 837
PPPP P APA P P GG P PP P PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.5 bits (73), Expect = 0.055
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Frame = +1
Query: 643 GGXPPPXPP------XPPPXAXPPPPAXXRGXPXXAPA 738
GG PPP PP PPP PPP G APA
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPA 796
Score = 32.3 bits (70), Expect = 0.13
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Frame = +1
Query: 652 PPPXP----PXPPPXAXP-PPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXP 801
PPP P P P P P PPPA G P P P G P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP----PGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.30
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXP 801
P P PP P PPPP G P P GG P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 30.3 bits (65), Expect = 0.52
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 310 GXPPPXPPXXXAAXXXPPPP 369
G PPP PP A PPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPP 778
Score = 30.3 bits (65), Expect = 0.52
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 310 GXPPPXPPXXXAAXXXPPPP 369
G PPP PP A PPPP
Sbjct: 760 GPPPPPPPPGVAGAGPPPPP 779
Score = 29.9 bits (64), Expect = 0.68
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Frame = +1
Query: 304 GXGXPPPXPPXXXAAXXXPPPP----XRGGGXRXXPARXXGXPXP 426
G PPP PP A PPPP GG R P P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = +1
Query: 667 PXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXP-----XGGGGXPXPPXP 801
P PPP A P P PA P P G G P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.1 bits (72), Expect = 0.073
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 776 PPPXGXRGXXXXXAGAXXGXPRXXAGGGGXAXGGGXGGXGGG 651
P G RG G G GG G A GGG GG GG
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 31.9 bits (69), Expect = 0.17
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = -3
Query: 815 GAQRXGXGGXGXPPPPXGXRGXXXXXAGAXXGXPRXXAGGGGXAXGGGXGGXGG 654
G R G GG G RG G G R A GG GG GG GG
Sbjct: 12 GGSRGGRGGFN------GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 794 GGXGXPPPPXGXRGXXXXXAGAXXGXPRXXAGGGGXAXGGGXGGXGG 654
G G G RG G G GGG GG GG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 27.5 bits (58), Expect = 3.6
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = -3
Query: 836 GXGAXXGGAQRXGXGGXGXPPPPXGXRGXXXXXAGAXXGXPRXXAGGGGXAXGGGXGGXG 657
G G GG G G G RG GA G R GG GG GG G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGR--GGARGG--RGGRGGARGGRGGSSGGRG 65
Query: 656 G 654
G
Sbjct: 66 G 66
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.17
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Frame = +1
Query: 646 GXPPPXPPXP---PPXAXPPPP 702
G PPP PP P PP PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 304 GXGXPPPXPPXXXAAXXXPPPPXRG 378
G PPP PP PPPP G
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 316 PPPXPPXXXAAXXXPPPPXRGG 381
PPP PP PPPP G
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPG 31
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.17
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXP--XPPXPXRCAPPXX 825
PPP P PP PP P PA + P P PP P + PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV---KSPPSAPSLPSAVPPMPPKVPPPPL 206
Query: 826 APXP 837
+ P
Sbjct: 207 SQAP 210
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPPPPAXXRG 717
PPP PP P P A P P G
Sbjct: 5 PPPPPPAPAPAAAAPAPPLMTG 26
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Frame = +1
Query: 652 PP--PXPPXP-----PPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRC 810
PP P PP P PP + PP P+ P AP P P P P +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK- 182
Query: 811 APPXXAPXP 837
+PP P
Sbjct: 183 SPPSAPSLP 191
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.39
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +1
Query: 652 PP--PXPPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXPXPPXPXRCAPPXX 825
PP P PP + P PP P A P P G P PP P AP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA-----PPMPAGPPSAPPPPLPASSAPSVP 1744
Query: 826 AP 831
P
Sbjct: 1745 NP 1746
Score = 29.5 bits (63), Expect = 0.90
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGG 774
PPP PPP + PP PA P P P P G
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAP-PPPLPASSAPSVPNPG 1747
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Frame = +1
Query: 637 AXGGXPPPXPPXPP-----PXAXPPPPAXXRG 717
A GG PPP PP PP + P PA +G
Sbjct: 301 ANGGLPPPPPPPPPSNDFWKDSNEPAPADNKG 332
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPPPPAXXRGXPXXAP 735
PPP PP P A PP A P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGP 1909
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Frame = +1
Query: 655 PPXPPXPPPXAXPPPPAXXRGXPXXAPAXXFXXPRXPXGGGGXP----XPPXPXRCAPP 819
PP P PP P P P P P P G P P P APP
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPP 558
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 6.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 652 PPPXPPXPPPXAXPP 696
P P PP PPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 646 GXPPPXPPXPPPXAXPPPPAXXRGXPXXAPA 738
G P PP PPP PPP G +PA
Sbjct: 939 GVMPAFPPPPPP---PPPLVSAAGGKFVSPA 966
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,686,522
Number of Sequences: 5004
Number of extensions: 21097
Number of successful extensions: 315
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 601638964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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