Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_J07
         (759 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871           29   3.0  
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150...    28   9.3  

>04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871
          Length = 398

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -1

Query: 195 FXKKARVIFFYKSAKVKKKVSN--FEIVNRSKYETALP 88
           F K ARV FFY+ + + +  S+  FE +N  +Y+ + P
Sbjct: 271 FQKDARVWFFYEDSSLLENPSDFRFEDINHKRYQKSSP 308


>09_02_0504 -
           10013784-10014041,10014558-10014660,10014932-10015093,
           10015416-10015549,10015633-10015716,10015839-10016129,
           10016362-10016694,10016823-10016965,10017273-10017429,
           10017513-10017616,10017728-10017888,10017971-10018287,
           10018396-10018677,10018759-10019226,10019338-10019391,
           10019689-10019742,10019943-10020021,10020108-10020196,
           10021153-10021273,10022321-10022637
          Length = 1236

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 139 FFLYFGTLIKKNNSRLLXEFHVLFIICAVISSVFFF 246
           F  Y+      N  R   +F VLF++C VI ++F F
Sbjct: 580 FLTYYVIGFDPNVLRFFRQFLVLFVLCEVIYALFRF 615


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,646,777
Number of Sequences: 37544
Number of extensions: 314294
Number of successful extensions: 780
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)