Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_J07
         (759 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82075-2|CAB60333.1|  328|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z70756-11|CAA94793.2|  368|Caenorhabditis elegans Hypothetical p...    28   8.3  
AF036706-14|AAK39276.2|  390|Caenorhabditis elegans Kinase, glh-...    28   8.3  

>Z82075-2|CAB60333.1|  328|Caenorhabditis elegans Hypothetical
           protein W07A8.5 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +1

Query: 130 IRNFFLYFGTLIKKNNSRLLXEFHVLFIICAVISSVFFFKYFS 258
           I  FFL F T+  +N+++    + ++  IC ++  + F   F+
Sbjct: 25  IFEFFLLFATISHRNDTKFPVAYLIVMTICGIVCKIAFITDFT 67


>Z70756-11|CAA94793.2|  368|Caenorhabditis elegans Hypothetical
           protein T06E4.7 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +1

Query: 151 FGTLIKKNNSRLLXEFHVLFIICAVISSVFFF 246
           FG    KN   LL  F V+FI+C  I SVFF+
Sbjct: 121 FGQYFTKNT--LLITFVVIFILCC-IESVFFY 149


>AF036706-14|AAK39276.2|  390|Caenorhabditis elegans Kinase,
           glh-binding protein 1 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 141 KVSNFEIVNRSKYETALPASTRVMARGVRANVKS*GIPYSEVV 13
           KV +F +  +   +T++  S  V+ R  RA     G+PYSE V
Sbjct: 179 KVLDFGLARKKNVDTSMRMSDYVVTRYYRAPEVILGLPYSEKV 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,990,676
Number of Sequences: 27780
Number of extensions: 245766
Number of successful extensions: 608
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)