Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_J06
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0096 + 9956702-9956818,9957056-9957265                           30   2.8  
11_01_0126 + 1021224-1021256,1021717-1022486,1022582-1022667,102...    29   4.9  
03_05_0267 - 22538631-22539452                                         29   4.9  
06_03_0548 + 22004338-22006746                                         29   6.5  
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284...    29   6.5  
01_07_0001 + 40324322-40324737,40325921-40326051,40326872-40327563     29   6.5  
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324...    28   8.6  
01_01_1195 - 9567023-9567789,9567871-9568120                           28   8.6  

>11_03_0096 + 9956702-9956818,9957056-9957265
          Length = 108

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +2

Query: 95  GRIVVYGGR----GALGAACVNHFKSFNYWV-ANIDLNPNEKADFNITVPKDASWVEQED 259
           GR    GGR    G + AA      + +YW   +    P+     N+ V  +    + E+
Sbjct: 13  GRAATLGGRRQLAGQVQAAARRRGHAASYWTWGSRSACPSTHGSQNVAVEMEEEEGQMEE 72

Query: 260 HVVNELG 280
           HVV ELG
Sbjct: 73  HVVQELG 79


>11_01_0126 +
           1021224-1021256,1021717-1022486,1022582-1022667,
           1024240-1024316,1025095-1025190,1025861-1026566,
           1026732-1026775
          Length = 603

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 471 APVKGNKPPVFKYLAANVAAIEELHTD*RHIKSACLL-RSLAAFPPAQPPATHIIA 307
           A V G + P+FK +A  +A    LH     I  AC+  RS    PPA   +  I++
Sbjct: 230 AGVNGARLPLFKSVARKLACNPNLHASVIGISWACISNRSHLTLPPALEGSVQIMS 285


>03_05_0267 - 22538631-22539452
          Length = 273

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +2

Query: 710 VXXRTQGPXXXQWXPXLPLXPPTXTXP*P*XTPPP 814
           V  R   P   +W P  P  PP    P P  T PP
Sbjct: 168 VRRRASPPARPRWWPCSPSSPPASPSPSPARTSPP 202


>06_03_0548 + 22004338-22006746
          Length = 802

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/40 (45%), Positives = 24/40 (60%)
 Frame = +2

Query: 338 GGNAAKDLSKQADLMWRQSVWSSSIAATLAAKYLNTGGLL 457
           GG   KD + Q  ++W  +V SSS A  + AK LNTG L+
Sbjct: 98  GGMLLKDYNGQ--VVWTNNV-SSSNAEQVQAKLLNTGNLI 134


>04_04_0465 +
           25427065-25427113,25428099-25428227,25428387-25428479,
           25428681-25428953,25429037-25429288,25429735-25430118,
           25430243-25430483,25431986-25432736
          Length = 723

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 317 CVAGGWAGGNAAKDLSKQADLMWRQSVWSSSIAAT 421
           C +G + GG   +   ++A   W    WS   AAT
Sbjct: 592 CTSGSFGGGGGEEYEDEEASSPWNNRSWSHDFAAT 626


>01_07_0001 + 40324322-40324737,40325921-40326051,40326872-40327563
          Length = 412

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/78 (24%), Positives = 32/78 (41%)
 Frame = +2

Query: 326 GGWAGGNAAKDLSKQADLMWRQSVWSSSIAATLAAKYLNTGGLLPLTGAKAALEASPRND 505
           GG  GG  A DL   A   W+    +++++A  AA         P   + ++  A+ +  
Sbjct: 23  GGGGGGGGALDLKLGAPTSWKT---TTTVSAASAAPAAVAPPPPPPASSSSSAAAAGKRA 79

Query: 506 RLWIGKGRCTPTHKISGC 559
           R   G+    P   + GC
Sbjct: 80  RAGQGQQAAVPACSVEGC 97


>03_01_0423 +
           3240224-3240394,3241464-3241628,3242322-3242339,
           3242494-3242836,3244138-3248540,3248928-3249107,
           3249108-3250892,3251055-3252173
          Length = 2727

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 451 TTSV*VLSCQCCCNRGTP 398
           TT+  V +C CCCN G P
Sbjct: 38  TTTTTVSTCPCCCNGGGP 55


>01_01_1195 - 9567023-9567789,9567871-9568120
          Length = 338

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +2

Query: 227 PKDASWVEQEDHVVNELGNALQGQKVNAIICVAGGWAGGNAAK 355
           P  A+  E+ED VV E      G  V   +C  G W     AK
Sbjct: 17  PATAAVGEEEDEVVEETEEGGHGGGVQGKLCARGHWRPAEDAK 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,150,877
Number of Sequences: 37544
Number of extensions: 435711
Number of successful extensions: 1411
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)