Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_J06
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81113-1|CAB03278.1|  236|Caenorhabditis elegans Hypothetical pr...   157   1e-38
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr...    29   4.4  

>Z81113-1|CAB03278.1|  236|Caenorhabditis elegans Hypothetical
           protein T03F6.1 protein.
          Length = 236

 Score =  157 bits (381), Expect = 1e-38
 Identities = 73/138 (52%), Positives = 101/138 (73%), Gaps = 1/138 (0%)
 Frame = +2

Query: 86  MATGRIVVYGGRGALGAACVNHFKSFNYWVANIDLNPNEKADFNITVPKDASWVEQEDHV 265
           M++G+++VYGG+GALG+A +  FK   Y V NIDL+ N++AD NI V  + +W EQE  +
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSI 60

Query: 266 VNELGNALQGQKVNAIICVAGGWAGGNA-AKDLSKQADLMWRQSVWSSSIAATLAAKYLN 442
           + +  ++LQG +V+ + CVAGGWAGG+A +KD  K ADLM +QSVWSS+IAA LA  +L 
Sbjct: 61  LEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLK 120

Query: 443 TGGLLPLTGAKAALEASP 496
            GGLL LTGA AA+  +P
Sbjct: 121 PGGLLQLTGAAAAMGPTP 138



 Score = 85.8 bits (203), Expect = 4e-17
 Identities = 40/52 (76%), Positives = 41/52 (78%)
 Frame = +3

Query: 501 MIGYGSAKAAVHQLTKSLGAKDSGLPXNSLAVAIMPVTLDTXMXRKWMPXAD 656
           MIGYG AKAAVH LT SL AKDSGLP NS  + IMPVTLDT M RKWMP AD
Sbjct: 140 MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNAD 191


>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
           protein D1044.2c protein.
          Length = 1090

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +2

Query: 338 GGNAAKDLSKQADLMWRQSVWSSSIAATLAAKYLNTGGLLPLTGAKAALEASPRND 505
           G N+  +     +LM+R   W+S   A + +   ++  LLP +G +A  + S  ++
Sbjct: 543 GSNSKNEKMTFVELMYRDLPWASGAEAGILSSDASSSILLPASGTEAISQLSKNSN 598


>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
           protein D1044.2a protein.
          Length = 1051

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/56 (25%), Positives = 28/56 (50%)
 Frame = +2

Query: 338 GGNAAKDLSKQADLMWRQSVWSSSIAATLAAKYLNTGGLLPLTGAKAALEASPRND 505
           G N+  +     +LM+R   W+S   A + +   ++  LLP +G +A  + S  ++
Sbjct: 543 GSNSKNEKMTFVELMYRDLPWASGAEAGILSSDASSSILLPASGTEAISQLSKNSN 598


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,553,164
Number of Sequences: 27780
Number of extensions: 314296
Number of successful extensions: 892
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)