Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_J04
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical pr...    65   7e-11

>Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical
           protein C06B8.8 protein.
          Length = 70

 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +1

Query: 103 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFK 207
           MP+EIK+IKDFL+KARRKDAKSVKIKKN  N KFK
Sbjct: 1   MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFK 35



 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +2

Query: 224 FLYTLVITDKEKAEKLKQSLPPGLQVKEVK 313
           +LYTLV+ DK+KAEKLKQSLPPG+QVKE+K
Sbjct: 41  YLYTLVVADKDKAEKLKQSLPPGIQVKELK 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,024,134
Number of Sequences: 27780
Number of extensions: 253700
Number of successful extensions: 596
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)