Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_I22
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    32   3.2  
BC110828-1|AAI10829.1|  390|Homo sapiens RUNX1 protein protein.        31   4.3  

>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 28/89 (31%), Positives = 29/89 (32%)
 Frame = +1

Query: 172 KKKKKXGXXXXKXFXFFFLKXPXXXXKXKXXXXXKXXKKKXPPPXKXXKKXPXXXXXXXQ 351
           KKKKK      K       K      K K     K  KKK     K  KK         +
Sbjct: 2   KKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 61

Query: 352 KXXXXXKXKKKKKXXPKKXXGXXXGXKKK 438
           K     K KKKKK   KK        KKK
Sbjct: 62  KKKKNKKKKKKKKKKKKKKKRKKKKKKKK 90



 Score = 31.9 bits (69), Expect = 3.2
 Identities = 28/89 (31%), Positives = 29/89 (32%)
 Frame = +1

Query: 172 KKKKKXGXXXXKXFXFFFLKXPXXXXKXKXXXXXKXXKKKXPPPXKXXKKXPXXXXXXXQ 351
           KKKKK      K       K      K K     K  KKK     K  KK         +
Sbjct: 3   KKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 62

Query: 352 KXXXXXKXKKKKKXXPKKXXGXXXGXKKK 438
           K     K KKKKK   KK        KKK
Sbjct: 63  KKKNKKKKKKKKKKKKKKKRKKKKKKKKK 91



 Score = 30.7 bits (66), Expect = 7.5
 Identities = 27/89 (30%), Positives = 29/89 (32%)
 Frame = +1

Query: 172 KKKKKXGXXXXKXFXFFFLKXPXXXXKXKXXXXXKXXKKKXPPPXKXXKKXPXXXXXXXQ 351
           KKKKK      K       K      K K     K  KKK     K  KK         +
Sbjct: 4   KKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 63

Query: 352 KXXXXXKXKKKKKXXPKKXXGXXXGXKKK 438
           K     K KKKKK   KK        KK+
Sbjct: 64  KKNKKKKKKKKKKKKKKKRKKKKKKKKKR 92


>BC110828-1|AAI10829.1|  390|Homo sapiens RUNX1 protein protein.
          Length = 390

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 21/63 (33%), Positives = 22/63 (34%)
 Frame = +1

Query: 217 FFFLKXPXXXXKXKXXXXXKXXKKKXPPPXKXXKKXPXXXXXXXQKXXXXXKXKKKKKXX 396
           F FL       K K     K  KKK     K  KK         +K     K KKKKK  
Sbjct: 327 FLFLSNKMLTCKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 386

Query: 397 PKK 405
            KK
Sbjct: 387 KKK 389


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,605,889
Number of Sequences: 237096
Number of extensions: 956116
Number of successful extensions: 1423
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)