BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_I20
(858 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 191 7e-49
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 189 3e-48
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 187 9e-48
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 183 1e-46
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 172 3e-43
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 155 6e-38
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 137 9e-33
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 83 4e-16
10_06_0107 + 10840633-10841200,10841364-10841488,10856838-10857380 31 1.6
08_02_1528 + 27666356-27667081 29 6.3
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 29 6.3
03_02_0942 - 12595108-12595347,12596227-12596362,12596917-12597083 29 6.3
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 6.3
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 28 8.3
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 8.3
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 8.3
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 191 bits (465), Expect = 7e-49
Identities = 116/244 (47%), Positives = 153/244 (62%), Gaps = 11/244 (4%)
Frame = +2
Query: 158 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 331
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 332 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 505
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 506 PESKVFYLKMKGDYYRYLG--RSGHRRNQTFWWXRIHRKHTKMLLKSARRKCSPHTP*GW 679
PESKVFYLKMKGDYYRYL ++G R ++T + K+A+ P
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDA-------AENTMVAYKAAQDIALAELPPTH 392
Query: 680 VWR-*ISQSFIMRY----*FAXQGVSTRQQAFDDAIAELDTLNEXSYXDSTLIXAXAAXX 844
R ++ +F + Y + + +QAFD+AI+ELDTL+E SY DSTLI
Sbjct: 393 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDN 452
Query: 845 LTXW 856
LT W
Sbjct: 453 LTLW 456
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +1
Query: 616 AYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILIRXTRRVN 744
AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEIL R N
Sbjct: 376 AYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACN 418
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 189 bits (460), Expect = 3e-48
Identities = 114/244 (46%), Positives = 154/244 (63%), Gaps = 11/244 (4%)
Frame = +2
Query: 158 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 331
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 332 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 505
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 506 PESKVFYLKMKGDYYRYLG--RSGHRRNQTFWWXRIHRKHTKMLLKSARRKCSPHTP*GW 679
PESKVFYLKMKGDYYRYL ++G R ++T + K+A+ P
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDA-------AENTMVAYKAAQDIALAELPPTH 174
Query: 680 VWR-*ISQSFIMRY----*FAXQGVSTRQQAFDDAIAELDTLNEXSYXDSTLIXAXAAXX 844
R ++ +F + Y + + +QAFD+AI+ELDTL+E SY DSTLI
Sbjct: 175 PIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDN 234
Query: 845 LTXW 856
LT W
Sbjct: 235 LTLW 238
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +1
Query: 616 AYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILIRXTRRVN 744
AY+ A +I+ A++ PTHPIRLGLALNFSVFYYEIL R N
Sbjct: 158 AYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACN 200
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 187 bits (456), Expect = 9e-48
Identities = 118/243 (48%), Positives = 149/243 (61%), Gaps = 11/243 (4%)
Frame = +2
Query: 161 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 334
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 335 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNP 508
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 509 ESKVFYLKMKGDYYRYLG--RSGHRRNQTFWWXRIHRKHTKMLLKSARRKCSPHTP*GWV 682
ESKVFYLKMKGDY+RYL +SG R + ++T + KSA+ P
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEA-------AENTLVAYKSAQDIALADLPTTHP 174
Query: 683 WR-*ISQSFIMRY----*FAXQGVSTRQQAFDDAIAELDTLNEXSYXDSTLIXAXAAXXL 847
R ++ +F + Y + + +QAFDDAIAELDTL E SY DSTLI L
Sbjct: 175 IRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNL 234
Query: 848 TXW 856
T W
Sbjct: 235 TLW 237
Score = 55.6 bits (128), Expect = 5e-08
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = +1
Query: 616 AYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILIRXTRRVN 744
AY+ A +I+ A + THPIRLGLALNFSVFYYEIL R N
Sbjct: 157 AYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACN 199
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 183 bits (446), Expect = 1e-46
Identities = 111/238 (46%), Positives = 149/238 (62%), Gaps = 10/238 (4%)
Frame = +2
Query: 173 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 346
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 347 WRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 520
WR++SSIEQK EG +E + KEYR K+E EL +IC +L LLD HL+P ++ ESKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 521 FYLKMKGDYYRYLG--RSGHRRNQTFWWXRIHRKHTKMLLKSARRKCSPHTP*GWVWR*I 694
FYLKMKGDY+RYL ++G R + + K + + A +P P + +
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDI---ALADLAPTHP---IRLGL 174
Query: 695 SQSFIMRY----*FAXQGVSTRQQAFDDAIAELDTLNEXSYXDSTLIXAXAAXXLTXW 856
+ +F + Y + + +QAFD+AI+ELDTL E SY DSTLI LT W
Sbjct: 175 ALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLW 232
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 616 AYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEIL 720
AY+ A +I+ A + PTHPIRLGLALNFSVFYYEIL
Sbjct: 152 AYKAAQDIALADLAPTHPIRLGLALNFSVFYYEIL 186
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 172 bits (418), Expect = 3e-43
Identities = 107/239 (44%), Positives = 145/239 (60%), Gaps = 13/239 (5%)
Frame = +2
Query: 179 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 343
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 344 SWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESK 517
SWR++SSIEQK EG + A+ YR +VE EL IC +L LLD+ L+P A+ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 518 VFYLKMKGDYYRYLG--RSGHRRNQTFWWXRIHRKHTKMLLKSARRKCSPHTP*GWVWR* 691
VFYLKMKGDY+RYL ++G R + + + A ++ SP P +
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDI---AMKELSPTHP---IRLG 183
Query: 692 ISQSFIMRY----*FAXQGVSTRQQAFDDAIAELDTLNEXSYXDSTLIXAXAAXXLTXW 856
++ +F + Y + + +QAFD+AI+ELDTL E SY DSTLI LT W
Sbjct: 184 LALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLW 242
Score = 58.0 bits (134), Expect = 9e-09
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 616 AYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEIL 720
AYQ A +I+ ++ PTHPIRLGLALNFSVFYYEIL
Sbjct: 162 AYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEIL 196
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 155 bits (375), Expect = 6e-38
Identities = 96/204 (47%), Positives = 118/204 (57%), Gaps = 8/204 (3%)
Frame = +2
Query: 269 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 442
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 443 REICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLG--RSGHRRNQTFWWXRIHRK 616
IC +L LLD HL+P A ESKVFYLKMKGDY+RYL +SG R Q
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQA---AESTMN 134
Query: 617 HTKMLLKSARRKCSPHTP*GWVWR*ISQSFIMRY----*FAXQGVSTRQQAFDDAIAELD 784
K A +P P + ++ +F + Y + + +QAFD+AI+ELD
Sbjct: 135 AYKAAQDIALADLAPTHP---IRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELD 191
Query: 785 TLNEXSYXDSTLIXAXAAXXLTXW 856
+L E SY DSTLI LT W
Sbjct: 192 SLGEESYKDSTLIMQLLRDNLTLW 215
Score = 58.4 bits (135), Expect = 7e-09
Identities = 28/46 (60%), Positives = 33/46 (71%)
Frame = +1
Query: 607 SQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILIRXTRRVN 744
+ AY+ A +I+ A + PTHPIRLGLALNFSVFYYEIL R N
Sbjct: 132 TMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACN 177
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 137 bits (332), Expect = 9e-33
Identities = 63/128 (49%), Positives = 89/128 (69%)
Frame = +2
Query: 176 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 355
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 356 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 535
+ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++ E+ VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 536 KGDYYRYL 559
KGDYYRYL
Sbjct: 123 KGDYYRYL 130
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 82.6 bits (195), Expect = 4e-16
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = +2
Query: 236 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 409
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 410 KEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYL 559
EYR KVE E+ +IC DV+ ++DK KGDYYRYL
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYL 92
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +1
Query: 628 AFEISKAKMQPTHPIRLGLALNFSVFYYEIL 720
A + ++ + PT PIRLGLALN SVFY EI+
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIM 176
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 749 QQAFDDAIAELDTLNEXSYXDSTLIXAXAAXXLTXW 856
+ AFD+A+AEL +L+E +Y DSTLI L W
Sbjct: 187 KNAFDEAVAELPSLSEENYKDSTLIMQLLRDNLALW 222
>10_06_0107 + 10840633-10841200,10841364-10841488,10856838-10857380
Length = 411
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +2
Query: 434 KELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLGRSGHRRNQTFWWXRIHR 613
KE+RE+ YDV LD+ + A N ++ + K +R + +R + + H
Sbjct: 70 KEVRELSYDVDDFLDEIALAAADNADA--ILIAGKVSKFRERAQEARQRRRRTRYGLCHH 127
Query: 614 KHTKMLLKSARRKCS 658
++ +S+RR+CS
Sbjct: 128 PTSR---RSSRRRCS 139
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +2
Query: 164 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 343
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 344 SWRVISSIEQKTE-GSERKQQMAKEYRV 424
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 28.7 bits (61), Expect = 6.3
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +2
Query: 284 NEERNLLSVAYKNVVGARRSSW-RVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYD 460
N + LLS AY N+ W + ISS+ Q+ S ++ Y+ + K L +
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 461 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLG 562
L ++D L+ + +SK KGD RY+G
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIG 382
>03_02_0942 - 12595108-12595347,12596227-12596362,12596917-12597083
Length = 180
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 563 RSGHRRNQTFWWXRIHRKHTKMLLKSARRKCSPHTP 670
R HRR+ + W + H +T L++ + K PH P
Sbjct: 119 RVSHRRSGRWRWMQNHDNNTTFSLEAEKPKREPHHP 154
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +2
Query: 155 PSSTMSVDKEEL-VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 331
P + D E++ ++ K AE ER + KE ++ SNEE L +KN
Sbjct: 327 PHYRVEEDGEKIKLEEIKGAESVERINFEERITKEEKNEAMKSSNEEVVSLVTGWKN--- 383
Query: 332 ARRSSWRV-ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLD 478
R W V + ++ T K+ AK + + +LR +LG +D
Sbjct: 384 -RIEEWDVDVDENDKDTRKLTPKRDPAKVDKAEKYTDLRSPICCILGHVD 432
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 143 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVA 313
I S+PS+ DKE L +A + D + +KE ++ + NE RN+L +A
Sbjct: 325 IQSMPSAMYIPDKEGLTP-LHVAAKMGHLDVIQDMLKECPDSAELVDNEGRNILHLA 380
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +2
Query: 437 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 541
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 173 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 334
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 335 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 427
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,108,509
Number of Sequences: 37544
Number of extensions: 442212
Number of successful extensions: 1404
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -