Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_I15
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_1025 + 13289146-13289586,13291882-13292087,13292174-132923...    31   1.2  
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317           29   6.5  

>03_02_1025 + 13289146-13289586,13291882-13292087,13292174-13292323,
            13292412-13292545,13292843-13292949,13293031-13293137,
            13293581-13293686,13294098-13294217,13294318-13294474,
            13295163-13295254,13295338-13295582,13295668-13296268,
            13296362-13296457,13296541-13296794,13297622-13297715,
            13299138-13299188
          Length = 986

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -3

Query: 170  HIGQVPSLGSSL-MTDVKHAAKKRPRIGKSTDLNMTSLIQYCMSKS*EFPIVS 15
            HI  + S+G+ L +  +K A     R  K T  N+TSL+  C   S  FP+V+
Sbjct: 906  HIFGIGSVGNDLALPQIKKALPPSQRKRKQTCDNLTSLLYTCSCFSANFPLVA 958


>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
          Length = 291

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/48 (33%), Positives = 18/48 (37%)
 Frame = +2

Query: 740 PPPGDXAXWRYXGXPPAXLXPXTPLXPGPFXPAXEPVXAPSXGRPXXA 883
           PPP     W     PP    P  P+   P  PA  P  AP+   P  A
Sbjct: 123 PPPQPPRAWD-PSPPPPPPAPAAPVLVPPPAPAPRPAPAPAPRVPARA 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,179,333
Number of Sequences: 37544
Number of extensions: 382866
Number of successful extensions: 825
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)