Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_I15
         (883 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY026292-1|AAK20020.1|  363|Homo sapiens single stranded DNA bin...    36   0.19 
BC000274-1|AAH00274.1|  385|Homo sapiens single stranded DNA bin...    31   7.3  

>AY026292-1|AAK20020.1|  363|Homo sapiens single stranded DNA
           binding protein-4 protein.
          Length = 363

 Score = 35.9 bits (79), Expect = 0.19
 Identities = 20/60 (33%), Positives = 22/60 (36%)
 Frame = +2

Query: 695 GEVLXXFFXALMKXAPPPGDXAXWRYXGXPPAXLXPXTPLXPGPFXPAXEPVXAPSXGRP 874
           G +   FF   M    P G     R    PPA L    PL PG   P+      PS G P
Sbjct: 115 GSMAAGFFQPFMSPRFPGGPRPTLRMPSQPPAGLPGSQPLLPGAMEPSPRAQGHPSMGGP 174


>BC000274-1|AAH00274.1|  385|Homo sapiens single stranded DNA
           binding protein 4 protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 16/44 (36%), Positives = 17/44 (38%)
 Frame = +2

Query: 743 PPGDXAXWRYXGXPPAXLXPXTPLXPGPFXPAXEPVXAPSXGRP 874
           P G     R    PPA L    PL PG   P+      PS G P
Sbjct: 153 PGGPRPTLRMPSQPPAGLPGSQPLLPGAMEPSPRAQGHPSMGGP 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,150,917
Number of Sequences: 237096
Number of extensions: 2204945
Number of successful extensions: 9669
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9627
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)