Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_I14
         (856 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK023298-1|BAB14515.1|  172|Homo sapiens protein ( Homo sapiens ...    31   4.0  
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.             31   4.0  
AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    31   5.3  
AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    30   9.3  

>AK023298-1|BAB14515.1|  172|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13236 fis, clone OVARC1000408. ).
          Length = 172

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +3

Query: 138 LKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFP 299
           LK T T L TT+R +L     T  + T T L+ ++ +  T+P       P  FP
Sbjct: 50  LKTTTTALKTTSRATLTTSVYTPTLGTLTPLNASMQMASTIPTEMMITTPYVFP 103


>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
          Length = 6995

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +3

Query: 138  LKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFP 299
            LK T T L TT+R +L     T  + T T L+ ++ +  T+P       P  FP
Sbjct: 2185 LKTTTTALKTTSRATLTTSVYTPTLGTLTPLNASMQMASTIPTEMMITTPYVFP 2238


>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 147 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 263
           T    +TT RTS  +P TTT+  T    + ++  T TVP
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVP 174


>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 30.3 bits (65), Expect = 9.3
 Identities = 21/91 (23%), Positives = 21/91 (23%)
 Frame = +2

Query: 554 PPXXGGXXXPPXXXXXXXXXXPPPPXXXXXPXPXXPXXXXXXXXXXXXXXPXXXXXXXPX 733
           PP       PP          P PP       P  P              P       P 
Sbjct: 294 PPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPP---PSSAGPPPPP 350

Query: 734 PPPXXXXFXXPXXXGXXXXXXPXXXXXPPPP 826
           PPP       P   G      P     PPPP
Sbjct: 351 PPPPLPNSPAPPNPGGPPPAPPPPGLAPPPP 381


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,674,847
Number of Sequences: 237096
Number of extensions: 2065112
Number of successful extensions: 7455
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5903
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)