Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_I10
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    31   1.5  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    31   1.5  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    31   1.5  
Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    28   7.8  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 815 PXLXXPPQPPGXKPXXXFXPPLPPP 889
           P    PP PPG  P     PP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPP 732



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 830 PPQPPGXKPXXXFXPPLPPP 889
           PP PPG  P     PP PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPP 747



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 830 PPQPPGXKPXXXFXPPLPPP 889
           PP PPG  P     PP PPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPP 763


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 815 PXLXXPPQPPGXKPXXXFXPPLPPP 889
           P    PP PPG  P     PP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPP 732



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 830 PPQPPGXKPXXXFXPPLPPP 889
           PP PPG  P     PP PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPP 747



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 830 PPQPPGXKPXXXFXPPLPPP 889
           PP PPG  P     PP PPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPP 763


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 815 PXLXXPPQPPGXKPXXXFXPPLPPP 889
           P    PP PPG  P     PP PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPP 315



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 830 PPQPPGXKPXXXFXPPLPPP 889
           PP PPG  P     PP PPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPP 330



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 830 PPQPPGXKPXXXFXPPLPPP 889
           PP PPG  P     PP PPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPP 346


>Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical
           protein T28C6.1 protein.
          Length = 281

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -2

Query: 888 GGGRGGXKXXXGFXPGGWGGXXNXG 814
           GGGRGG +      PGGWGG    G
Sbjct: 237 GGGRGGQQ-----GPGGWGGGGRGG 256


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 885 GGRGGXKXXXGFXPGGWGGXXNXG 814
           GG GG +   G  PGGWG     G
Sbjct: 33  GGWGGNRWGGGGGPGGWGNNGGGG 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,320,549
Number of Sequences: 27780
Number of extensions: 153624
Number of successful extensions: 1389
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)