BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_I02
(828 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 29 0.13
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 27 0.53
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 26 1.2
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 25 2.8
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 25 2.8
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 3.8
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 25 3.8
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 25 3.8
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 24 5.0
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 6.6
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 24 6.6
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 29.5 bits (63), Expect = 0.13
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 422 QQQPRPERQGVRDQELAQRHSQRAQLQHAGRR 517
QQQP+ ++Q + Q+ QR Q+ Q QH G+R
Sbjct: 257 QQQPQQQQQPQQKQQQLQRRQQQQQ-QHQGQR 287
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 27.5 bits (58), Expect = 0.53
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 422 QQQPRPERQGVRDQELAQRHSQRAQLQHAGRRSGLHVQ-TEGGRIVERGAL*RHQPE*LL 598
QQQ +P+RQ V + Q+ +R Q QH R + Q E R +R Q + +
Sbjct: 77 QQQRQPQRQAVVGTQ--QQQQRRQQQQHQQRSNATQAQRREQLRNEQRRPARLRQDQIIF 134
Query: 599 GRGXAEPVPISVQLARLQRRLQE 667
+ + RL RLQE
Sbjct: 135 EPAEGTSYKVLYEKIRLNPRLQE 157
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 26.2 bits (55), Expect = 1.2
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = -3
Query: 520 TPPPSVLKLGALGMALGEFLIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPC 341
TP PS A +++GEF + S L + P++PS P R +SP
Sbjct: 35 TPSPSSSSAAAAVVSVGEFTLGPGRTYASALSPSSSSASPSSPSSVASPNSRAS-NMSP- 92
Query: 340 PFTLSRASPAEAALSL 293
S AS AA +L
Sbjct: 93 ---ESSASDQSAAYTL 105
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 25.0 bits (52), Expect = 2.8
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 338 RARAEPDRDPHSRLXXXXXXXXXXXFVPQQQPRPERQGV--RDQELAQRHSQRAQLQ 502
R++ +P + R QQQ +P+RQ V Q+ +R Q+ QLQ
Sbjct: 279 RSQQQPQQQQQQRQLQRQAVGIAQHQQQQQQRQPQRQAVAGSQQQQQERMQQQQQLQ 335
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 25.0 bits (52), Expect = 2.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 422 QQQPRPERQGVRDQELAQRHSQRAQLQ 502
QQQ R +++ + Q+ Q+H QR Q Q
Sbjct: 250 QQQQRNQQREWQQQQQQQQHQQREQQQ 276
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.6 bits (51), Expect = 3.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 622 SDLRPARSTSTPASRSLIRLFTDLRGSPMWDSPSR 726
S+ PA +++ SRS+ R+ T SP++ +R
Sbjct: 1310 SEPAPAAPSNSTPSRSVARIVTSFTDSPLFSRRNR 1344
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 24.6 bits (51), Expect = 3.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 505 RWAAEWTTCSNRRWAHR 555
+W AE T + RWAHR
Sbjct: 880 QWDAEADTSRHTRWAHR 896
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 422 QQQPRPERQGVRDQELAQRHSQRAQ 496
QQQ R ++Q + Q+ Q+H Q+ Q
Sbjct: 343 QQQQRQQQQRQQQQQQQQQHQQQQQ 367
Score = 23.4 bits (48), Expect = 8.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 422 QQQPRPERQGVRDQELAQRHSQR 490
QQQ RP++Q + Q Q+ SQ+
Sbjct: 468 QQQQRPQQQRPQQQRPQQQRSQQ 490
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 24.2 bits (50), Expect = 5.0
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 496 TSTRWAAEWTTCSNRRWAHR 555
T RW EW + RW +R
Sbjct: 850 TMERWQREWDESVHGRWTYR 869
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.8 bits (49), Expect = 6.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 409 TLPATPSCSPKPGMRVPVRLSPCPFTLSRA 320
+LP TP P R PV CP L+ A
Sbjct: 1365 SLPLTPPSVPYASDRPPVATFSCPDGLAHA 1394
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.8 bits (49), Expect = 6.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -3
Query: 409 TLPATPSCSPKPGMRVPVRLSPCPFTLSRA 320
+LP TP P R PV CP L+ A
Sbjct: 1362 SLPLTPPSVPYASDRPPVATFSCPDGLAHA 1391
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,686
Number of Sequences: 2352
Number of extensions: 14333
Number of successful extensions: 38
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -