BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H21
(877 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 173 3e-44
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 89 1e-18
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 87 4e-18
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 74 2e-14
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 48 2e-06
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 46 9e-06
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 44 4e-05
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 35 0.017
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 29 0.66
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.5
SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|ch... 27 3.5
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 27 3.5
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.5
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 27 3.5
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 6.1
SPBC3B9.09 |vps36||RBZ zinc finger protein Vps36|Schizosaccharom... 26 8.1
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 173 bits (421), Expect = 3e-44
Identities = 96/167 (57%), Positives = 104/167 (62%), Gaps = 1/167 (0%)
Frame = +3
Query: 249 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 428
P G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 97
Query: 429 PEEHPVLLTEAPLNPKANREKMTPDHVRNIQ-HARHVRRHPSRALAVRVRSYHRYRAGLR 605
PEEHP LLTEAPLNPK+NREKMT A +V +L R+
Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDS-- 155
Query: 606 RRCLPHRTHLRRIRTPPTPSCVWTWAGRDLTDYLXXILXXRXXSFPT 746
+ H + P AGRDLTDYL IL R +F T
Sbjct: 156 GDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFST 202
Score = 102 bits (244), Expect = 8e-23
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +1
Query: 499 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGEGVSHTVPIYEGYALP 654
QI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSG+GV+HTVPIYEGYALP
Sbjct: 121 QIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALP 172
Score = 77.8 bits (183), Expect = 2e-15
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +2
Query: 146 KLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 262
++ LV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 4 EIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHG 42
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 88.6 bits (210), Expect = 1e-18
Identities = 59/153 (38%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Frame = +3
Query: 264 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEH 440
VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + + +L PEEH
Sbjct: 47 VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106
Query: 441 PVLLTEAPLNPKANREKMTPDHVRNIQ-HARHVRRHPSRALAVRVRSYHRYRAGLRRRCL 617
P+LLTE PL N+EK+ + A P AL R+ G+ C
Sbjct: 107 PLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASART-----TGIVLECG 161
Query: 618 PHRTHLRRIRTP-PTPSCVW--TWAGRDLTDYL 707
TH I PS + GRD+TDYL
Sbjct: 162 DGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYL 194
Score = 71.3 bits (167), Expect = 2e-13
Identities = 28/52 (53%), Positives = 43/52 (82%)
Frame = +1
Query: 499 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGEGVSHTVPIYEGYALP 654
+ +ET N PA+ ++Q VL+LYAS RTTGIVL+ G+G++H+VPIY+G+++P
Sbjct: 126 EYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIP 177
Score = 52.4 bits (120), Expect = 8e-08
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +2
Query: 158 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 259
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHE 45
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 86.6 bits (205), Expect = 4e-18
Identities = 34/70 (48%), Positives = 54/70 (77%)
Frame = +3
Query: 285 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 464
KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 465 LNPKANREKM 494
+NP ANREKM
Sbjct: 110 MNPVANREKM 119
Score = 66.9 bits (156), Expect = 4e-12
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +1
Query: 499 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGEGVSHTVPIYEGYAL 651
+ MFE + +YVAIQAVLSLYA G ++G+V+DSG+GV+H VP+YE L
Sbjct: 121 ETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVL 171
Score = 45.6 bits (103), Expect = 9e-06
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 158 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 250
+V+DNG+G K G+A D+ PR FPSIVGRP
Sbjct: 6 IVLDNGTGFVKVGYAKDNFPRFQFPSIVGRP 36
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 74.1 bits (174), Expect = 2e-14
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 288 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 464
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 465 LNPKANRE 488
LNP NRE
Sbjct: 133 LNPPENRE 140
Score = 58.4 bits (135), Expect = 1e-09
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 8/59 (13%)
Frame = +1
Query: 499 QIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGEGVSHTVPIYEGYAL 651
+IMFE+FN +Y+A+QAVL+L AS + TG V+DSG+GV+H +P+ EGY +
Sbjct: 144 EIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVI 202
Score = 40.7 bits (91), Expect = 3e-04
Identities = 14/28 (50%), Positives = 23/28 (82%)
Frame = +2
Query: 158 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 241
+++DNG+G K G+AG+DAP VFP+++
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVI 35
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 47.6 bits (108), Expect = 2e-06
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 330 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 491
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVK 116
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 499 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGEGVSHTVPIYEGYAL 651
+ MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 119 ETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169
Score = 35.1 bits (77), Expect = 0.013
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 158 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGRDGR--YGTEGLVRR*RGTEQK 322
+V+D GS + GF+G+D P+ V PS G + DGR +G E + + G E K
Sbjct: 14 IVIDPGSKWTRIGFSGEDIPKCVLPSYCG----EFSDGRRLFGEEYIYKSNPGMEIK 66
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 45.6 bits (103), Expect = 9e-06
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +3
Query: 276 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 452
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 453 TEAPLNPKANREKMT 497
TE NP R MT
Sbjct: 121 TEPLANPTYVRSTMT 135
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 499 QIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGEGVSHTVPIYEG 642
+++FE +N P++ I + S Y + + ++GIVL+ G SH +P+ G
Sbjct: 136 ELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNG 185
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 158 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 253
LV+DNGS +AG+ G+ P+ VF ++V R R
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 43.6 bits (98), Expect = 4e-05
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +3
Query: 249 PAIRGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 422
P+ GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 423 VAPEEHPVLLTEAPLNPKANREKM 494
V P E+ +++TE NP++ R+++
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQI 120
Score = 35.1 bits (77), Expect = 0.013
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 146 KLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVG 244
++P LV+D GS + G+AG+++P + PS G
Sbjct: 9 EIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 34.7 bits (76), Expect = 0.017
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 499 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGEGVSHTVPIYEG 642
Q FE P +A + ++ LYA G G+V+D G + PI +G
Sbjct: 167 QFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDG 214
Score = 25.8 bits (54), Expect = 8.1
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 345 PIEHGIVTNWDDMEKIWHHTF 407
PI+ G V +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 29.5 bits (63), Expect = 0.66
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 408 YNELRVAPEEHPVLLTEAPLNPKANRE-----KMTPDHVRNIQHARHVRRHPSRALAVRV 572
Y++L + +E V TE+ N A R K+T +RN+ H+ + + +A+R
Sbjct: 182 YHDLHIEIDEEDVPSTESRGNLNARRPQSGLLKITVGSLRNVTHSAGISKQTEMIVAIRA 241
Query: 573 RSYHRYR 593
R R
Sbjct: 242 EDLERAR 248
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 440 PRPAH*GSPQPQGQQREDDPR-SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAKVS 616
P+PA P P + P+ S PP T+P P P VP + AK
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT----AKAP 1237
Query: 617 PTPYPSTK 640
P P PS++
Sbjct: 1238 PVPAPSSE 1245
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 530 PCTSPSKPCSRCTRPVVPPVSCWTPAKVSPTPYPSTK 640
P T+P P T PV P S P+ P P PS++
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSE 1072
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 503 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPAKVSPTPYPSTKDTHSP 655
SC+ ++ PP T S S P VPP S T + PT ST SP
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSP 221
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 503 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAKVSPTPYPSTKDTHS 652
SC+ ++ PP T S S P VPP S + + P S+ DT+S
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNS 162
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +2
Query: 497 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAKVSPTPYPSTKDT 646
P S S ST PP S S + + + SC T + PT +T T
Sbjct: 361 PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVT 410
>SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 563
Score = 27.1 bits (57), Expect = 3.5
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 461 SPQPQGQQREDDPRSCSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCWTPAKVSPTPYPST 637
SP + R+ P+SC R +PCSRC R V + T K++ P+PS
Sbjct: 4 SPPALKKFRKRSPKSCLICRRRKVKCDRQQPCSRCKERNEVCTYADDTIDKMNVGPHPSH 63
Query: 638 KDTHS 652
+ S
Sbjct: 64 SENAS 68
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/45 (24%), Positives = 19/45 (42%)
Frame = +2
Query: 572 PVVPPVSCWTPAKVSPTPYPSTKDTHSPHAILRLDLGRSRSHRLP 706
PV+PPV + P + P + + P+A+ D +P
Sbjct: 235 PVLPPVEIYDPEDIKPADWVDEPEIPDPNAVKPDDWDEDAPRMIP 279
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 551 PCSRCTRPVVPPVSCWTPAKVSPTPYPST 637
P SR T+P+ S +P +VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 567 RVRSYHRYRAGLRRRCLPHRTHLRR 641
R RS HR+ G RR P+RTHL R
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSR 164
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 218 EEHHLLRNRPCTYRSHCLLPTAATSSSHILN*YSIIK*VTS 96
E +H L + Y SH L + SS I+ YSII TS
Sbjct: 896 ERYHFLEKQWTLYYSHSKLMFSPFSSQRIILLYSIINKETS 936
>SPBC3B9.09 |vps36||RBZ zinc finger protein
Vps36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 467
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 465 LNPKANREKMTPDHVRNIQH-ARHVRRHPSRALAVR 569
++PK N K+ +R++QH +R+ R P L++R
Sbjct: 58 VDPKKNSLKIKISDIRDVQHTSRYFRSSPKIRLSLR 93
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,319,165
Number of Sequences: 5004
Number of extensions: 75107
Number of successful extensions: 281
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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