Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H20
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 162 3e-40
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 157 9e-39
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 32 0.59
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 29 3.2
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical... 29 5.5
AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA ... 29 5.5
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 162 bits (393), Expect = 3e-40
Identities = 81/125 (64%), Positives = 96/125 (76%), Gaps = 1/125 (0%)
Frame = +2
Query: 404 DLFGSGXXXXXXXXXRIRQERLKAYADKKSKKPALIAKSSILLDVXPWDDETDMKEMENQ 583
DLFGS +I +ERL AYA+KK+KK IAKSS++LDV PWDDETD+ EME
Sbjct: 89 DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKL 148
Query: 584 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEDFVQSVDIA 760
VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI +FED VQSVDI
Sbjct: 149 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIV 208
Query: 761 AFNKI 775
AFNKI
Sbjct: 209 AFNKI 213
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 133 PRXLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTSAER 309
P L N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +ASYT AER
Sbjct: 8 PAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAER 67
Query: 310 KTWS 321
KTW+
Sbjct: 68 KTWA 71
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 157 bits (381), Expect = 9e-39
Identities = 79/125 (63%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
Frame = +2
Query: 404 DLFGSGXXXXXXXXXRIRQERLKAYADKKSKKPALIAKSSILLDVXPWDDETDMKEMENQ 583
DLFGS ++ +ERL AYA KK+ K IAKSS++LDV PWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198
Query: 584 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQ-EFEDFVQSVDIA 760
VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI +FED VQSVDI
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIV 258
Query: 761 AFNKI 775
AFNKI
Sbjct: 259 AFNKI 263
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 325 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 167
P + C QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 596 EMEGLLWGASKLVPVGYGINKLQIMC----VIEDDKVSVDLLTEKIQEFEDFVQ 745
E E L G+ LVPV N+LQI+C DD V + T + E D ++
Sbjct: 14 EDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVDSIR 67
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -1
Query: 325 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 167
P + C QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
>AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical
protein Y105E8A.19 protein.
Length = 722
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = -1
Query: 619 SPEKAFHFNSAYLVFHFLHIGFIIPWLDIKENRGLGNESWFLRLLVSICFQTFLSN 452
SP+K H H+GFI P L IKE G +LVS + FL N
Sbjct: 399 SPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISDAGGVPVIATILVS-PLEAFLDN 453
>AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA
synthetase (cytoplasmic)protein.
Length = 722
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = -1
Query: 619 SPEKAFHFNSAYLVFHFLHIGFIIPWLDIKENRGLGNESWFLRLLVSICFQTFLSN 452
SP+K H H+GFI P L IKE G +LVS + FL N
Sbjct: 399 SPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISDAGGVPVIATILVS-PLEAFLDN 453
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,775,016
Number of Sequences: 27780
Number of extensions: 356740
Number of successful extensions: 936
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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