Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H19
(1234 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 35 0.14
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.96
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.96
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.96
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 2.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 2.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 2.2
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 2.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 8.9
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 8.9
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 34.7 bits (76), Expect = 0.14
Identities = 25/87 (28%), Positives = 26/87 (29%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P P P +PP P P PP GG F A PP P P
Sbjct: 146 PPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGA------PPSGGPPGP 199
Query: 87 XXRXPXPXPXRGPGRPLXXPXXPXXGG 7
P P GP P P GG
Sbjct: 200 FNPSEAP-PSGGPTGPFDPSGAPPSGG 225
Score = 34.7 bits (76), Expect = 0.14
Identities = 27/96 (28%), Positives = 30/96 (31%), Gaps = 9/96 (9%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSP-- 94
P P P +PP P P PP GG F A + PP P +P
Sbjct: 266 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSG-GPPGPFNPSG 324
Query: 93 -XPXXRXPXP------XPXRGPGRPLXXPXXPXXGG 7
P P P P GP P P GG
Sbjct: 325 APPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG 360
Score = 34.3 bits (75), Expect = 0.18
Identities = 25/87 (28%), Positives = 26/87 (29%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P P P +PP P P PP GG F A PP P P
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA------PPSGGPPGP 259
Query: 87 XXRXPXPXPXRGPGRPLXXPXXPXXGG 7
P P GP P P GG
Sbjct: 260 FNPSGAP-PSGGPPGPFDPSGAPPSGG 285
Score = 34.3 bits (75), Expect = 0.18
Identities = 25/87 (28%), Positives = 26/87 (29%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P P P +PP P P PP GG F A PP P P
Sbjct: 326 PPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA------PPSGGPPGP 379
Query: 87 XXRXPXPXPXRGPGRPLXXPXXPXXGG 7
P P GP P P GG
Sbjct: 380 FDPSGAP-PSGGPPGPFDPSGAPPSGG 405
Score = 34.3 bits (75), Expect = 0.18
Identities = 25/87 (28%), Positives = 26/87 (29%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P P P +PP P P PP GG F A PP P P
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA------PPSGGPPGP 424
Query: 87 XXRXPXPXPXRGPGRPLXXPXXPXXGG 7
P P GP P P GG
Sbjct: 425 FNPSGAP-PSGGPPGPFNPSGAPPSGG 450
Score = 34.3 bits (75), Expect = 0.18
Identities = 25/87 (28%), Positives = 26/87 (29%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P P P +PP P P PP GG F A PP P P
Sbjct: 416 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA------PPSGGPPGP 469
Query: 87 XXRXPXPXPXRGPGRPLXXPXXPXXGG 7
P P GP P P GG
Sbjct: 470 FNPSGAP-PSGGPPGPFDPSGAPPSGG 495
Score = 33.9 bits (74), Expect = 0.24
Identities = 27/96 (28%), Positives = 29/96 (30%), Gaps = 9/96 (9%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSP-- 94
P P P +PP P P PP GG F A + PP P P
Sbjct: 251 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSG-GPPGPFDPSG 309
Query: 93 -XPXXRXPXP------XPXRGPGRPLXXPXXPXXGG 7
P P P P GP P P GG
Sbjct: 310 AQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 345
Score = 32.7 bits (71), Expect = 0.55
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 3/72 (4%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSP-- 94
P P P +PP P P PP GG F A + PP P P
Sbjct: 461 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSG-GPPGPFDPSG 519
Query: 93 -XPXXRXPXPXP 61
P P P P
Sbjct: 520 APPSGMPPVPLP 531
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/87 (27%), Positives = 25/87 (28%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P P P +PP P PP GG F A PP P P
Sbjct: 191 PPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGA------PPSGGPPGP 244
Query: 87 XXRXPXPXPXRGPGRPLXXPXXPXXGG 7
P P GP P P GG
Sbjct: 245 FDPSGAP-PSGGPPGPFNPSGAPPSGG 270
Score = 30.7 bits (66), Expect = 2.2
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = -2
Query: 225 SPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXPXXRXPXPXPXRGPG 46
+PP P P PP GG F A PP P P P P GP
Sbjct: 145 APPSGGPPGPFDPSGAPPSGGPPGLFDPSGA------PPSGGPPGPFGPSGAP-PSGGPP 197
Query: 45 RPLXXPXXPXXGG 7
P P GG
Sbjct: 198 GPFNPSEAPPSGG 210
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.96
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P SP PR SPP P PPP G A P SP P
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP-P 350
Query: 87 XXRXPXPXPXR-GPGR 43
P P R GPG+
Sbjct: 351 TGSPPTGRPPRGGPGK 366
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.96
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P SP PR SPP P PPP G A P SP P
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP-P 371
Query: 87 XXRXPXPXPXR-GPGR 43
P P R GPG+
Sbjct: 372 TGSPPTGRPPRGGPGK 387
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.96
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P SP PR SPP P PPP G A P SP P
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP-P 356
Query: 87 XXRXPXPXPXR-GPGR 43
P P R GPG+
Sbjct: 357 TGSPPTGRPPRGGPGK 372
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = -2
Query: 222 PPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXPXXRXPXPXPXRGPGR 43
PP P P PPP GG + PP P P P P PG
Sbjct: 715 PPPGLPPITGGPPPPPPPGG-------LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 42 PLXXPXXPXXGG 7
P P GG
Sbjct: 768 CPPPPPPPPPGG 779
Score = 30.3 bits (65), Expect = 2.9
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P P P PP P P PPP GG PP P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP---------PISGGPPPP--PPP 764
Query: 87 XXRXPXPXPXRGPGRPLXXPXXPXXGG 7
P P P PG P P G
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = -2
Query: 222 PPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXPXXRXPXPXPXRGPGR 43
PP P P PPP GG + PP P P P P PG
Sbjct: 715 PPPGLPPITGGPPPPPPPGG-------LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 42 PLXXPXXPXXGG 7
P P GG
Sbjct: 768 CPPPPPPPPPGG 779
Score = 30.3 bits (65), Expect = 2.9
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P P P PP P P PPP GG PP P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP---------PISGGPPPP--PPP 764
Query: 87 XXRXPXPXPXRGPGRPLXXPXXPXXGG 7
P P P PG P P G
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = -2
Query: 222 PPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXPXXRXPXPXPXRGPGR 43
PP P P PPP GG + PP P P P P PG
Sbjct: 298 PPPGLPPITGGPPPPPPPGG-------LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 42 PLXXPXXPXXGG 7
P P GG
Sbjct: 351 CPPPPPPPPPGG 362
Score = 30.3 bits (65), Expect = 2.9
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -2
Query: 267 PXFXSPXXXAXPRXSPPXXXXPSXXXPLXPPPHGGXXXXFXXXXALXAXRSPPXPXSPXP 88
P P P PP P P PPP GG PP P P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP---------PISGGPPPP--PPP 347
Query: 87 XXRXPXPXPXRGPGRPLXXPXXPXXGG 7
P P P PG P P G
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 114 PPXPXSPXPXXRXPXPXPXRGPGRPLXXPXXP 19
PP P P P P P P R P P P P
Sbjct: 549 PPPPREPTPREPTPEPEPVREPTPPPPPPAKP 580
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -2
Query: 180 PPPHGGXXXXFXXXXALXAXRSPPXPXSPXPXXRXPXPXPXRGP 49
PPP + A +PP P +P P P P P P
Sbjct: 28 PPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAP 71
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +2
Query: 596 RXXXRXGXGRGXXEGRGXRAXXGRXGXXSRAGXTGXXAR 712
R R G GRG GRG R GR G R G G R
Sbjct: 323 RKNQRQGGGRGGRGGRGGRG--GRGGRGGRGGRGGRGDR 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.141 0.451
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,282,604
Number of Sequences: 27780
Number of extensions: 109129
Number of successful extensions: 799
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3412067766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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