Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_H16
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0411 + 3670758-3672365                                           33   0.30 
09_04_0717 + 19706160-19706327,19707036-19707157,19707408-197075...    29   4.9  
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968...    29   6.4  
02_05_1308 + 35601314-35601390,35602486-35602566,35603513-356040...    28   8.5  

>08_01_0411 + 3670758-3672365
          Length = 535

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 287 CYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQICDLRF 427
           CY   G    A  +   + KP  W MP +K    +    +Q+ DLRF
Sbjct: 261 CYAKNGCAREALAVFNRMLKPHVWVMPNEKTFSSVISACSQLGDLRF 307


>09_04_0717 +
           19706160-19706327,19707036-19707157,19707408-19707510,
           19707644-19707734,19707960-19708132,19708534-19708622,
           19708995-19709085,19709272-19709361,19709807-19709854,
           19710033-19710104,19710181-19710274,19710350-19710494,
           19710809-19710951,19711601-19711751,19712276-19712449,
           19712799-19712874
          Length = 609

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -3

Query: 432 LSNLRSQICASFFFNFSHILSAGIDQLKGFDNSPKMPVADSSRPP 298
           LS L S +  ++F N    L AG+  ++  D S  +  + S +PP
Sbjct: 424 LSGLTS-VTRNYFENLVQTLEAGLQDVRATDQSASVSTSSSKKPP 467


>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
            14397510-14397609
          Length = 2033

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
 Frame = +2

Query: 95   FIYYFLATAVQVVLS-----LREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCK 259
            FIY     + Q+ LS     + +  C+     +E   A LS   +KD + +EAE K    
Sbjct: 1443 FIYLIEILSAQLALSEFDLNINKSICQELASELESCMAQLS---QKDDELLEAEDKVHLL 1499

Query: 260  GSKNKENRFCYYLGGLE---ESATGILGELSKPLSWSMPADKICEKLKKKDAQICDLR 424
              KN+E   C  +G L+   E A  +  EL K ++       + E+   KD +I  LR
Sbjct: 1500 QGKNRE--LCGVVGSLQVAIEGAKIVKEELEKKIT------TLTEEGNTKDGEISLLR 1549


>02_05_1308 +
           35601314-35601390,35602486-35602566,35603513-35604064,
           35604998-35605408,35606830-35607544
          Length = 611

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +2

Query: 503 WDEVCDGCIEKTDFIKRIEELKPQYMGRS 589
           WD VC G  ++TD+ +++EE+  + +GR+
Sbjct: 504 WDAVCSGGEDETDW-RKVEEILRRCIGRN 531


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,823,752
Number of Sequences: 37544
Number of extensions: 337680
Number of successful extensions: 718
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)