Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_H16
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical...   154   7e-38
U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like pr...    32   0.62 
Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical pr...    31   0.81 
Z81063-1|CAB02952.1|  376|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical...    29   4.3  
AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical p...    29   5.7  
AF043697-2|AAB97556.1|  820|Caenorhabditis elegans Patched relat...    28   7.6  

>AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical
           protein Y54G2A.23 protein.
          Length = 168

 Score =  154 bits (374), Expect = 7e-38
 Identities = 72/158 (45%), Positives = 97/158 (61%), Gaps = 1/158 (0%)
 Frame = +2

Query: 110 LATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKENRFC 289
           L + V VV S     CEVC K ++   A +    K  P  I    ++ C+ ++NKEN+FC
Sbjct: 7   LISLVIVVASAAAPQCEVCKKVLDDVMAKVPAGDKSKPDAIGKVIREHCETTRNKENKFC 66

Query: 290 YYLGGLEESATGILGELSKPLSWSMPADKIC-EKLKKKDAQICDLRFDKQIDLNNXXXXX 466
           +Y+G L ESAT I+ E++KPLSWSMP +K+C EKLK KDAQIC+L++DK +D        
Sbjct: 67  FYIGALPESATSIMNEVTKPLSWSMPTEKVCLEKLKGKDAQICELKYDKPLDWKTIDLKK 126

Query: 467 XXXXXXXXXXNDWDEVCDGCIEKTDFIKRIEELKPQYM 580
                      +W EVC GC EK + IKRIEELKP+Y+
Sbjct: 127 MRVKELKNILGEWGEVCKGCTEKAELIKRIEELKPKYV 164


>U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like
           protein family protein4 protein.
          Length = 103

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 86  LVCFIYYFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKK 250
           LV  +  F+ATAV +        C++C   V+K+  ++  DV    K  + E KK
Sbjct: 5   LVLAVLVFVATAVVLPHQRNSLGCQMCELAVKKYDGSVDKDVNGIKKDFDTECKK 59


>Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical
           protein F44F4.4 protein.
          Length = 890

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +2

Query: 110 LATAVQVVLSLREGDC--EVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKENR 283
           + TA+ +  S+  G    E  +K V K +  +S + K +   +E  F +FC+G       
Sbjct: 84  ITTAILIRSSITNGSLLEEQRLKEVVKVSDFISTNFKLNVSGVEKNFNQFCRGFCQANEP 143

Query: 284 FCYYLGGLEESATGILGELSKPLSWSMP 367
              Y  GL+         +SK +  S P
Sbjct: 144 VRQYYNGLQILGKNQTDGISKRIDLSYP 171


>Z81063-1|CAB02952.1|  376|Caenorhabditis elegans Hypothetical
           protein F15D3.2 protein.
          Length = 376

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +2

Query: 41  KILDTSSNTRQKCL--NLVCFIYYFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVK 214
           + LDT+    Q  +  N+  ++   L+ A Q+    +E   E   K V  FA+T  DD  
Sbjct: 95  QFLDTNKMMDQLKISSNIGSYLVTGLSGAEQLFKQDKEHSREHYRKVVIVFASTYKDDGA 154

Query: 215 KDPKKIEAEF 244
            DPK + A F
Sbjct: 155 NDPKPVAARF 164


>Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 122 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 271
           V+ +  ++EGD      T+ +F A   D  + DP  +    ++F  G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299


>AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 122 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 271
           V+ +  ++EGD      T+ +F A   D  + DP  +    ++F  G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299


>AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical
           protein C36C5.12 protein.
          Length = 219

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 161 VCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 271
           +C++ +  FAA + D++  D K    EFKK C   KN
Sbjct: 59  LCIERLRDFAAKV-DELDMDKKSELKEFKKTCDSLKN 94


>Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical
           protein F22D6.3a protein.
          Length = 545

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
 Frame = +2

Query: 110 LATAVQVVL-SLREGDCEVCVKTVE--KFAATLSDDVKKDPKKIEAEFKKFCK-GSKNKE 277
           LAT VQ +L S   G+  +  K+ E   +       +KK  KK EAE KK  K G + KE
Sbjct: 23  LATLVQAMLISKNSGEFLMKKKSEEGESWEPAAKAAIKKAVKKYEAEVKKLEKAGCREKE 82

Query: 278 NRFCYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQI 412
                +   LEE A  I   L K L       KI E ++ +D ++
Sbjct: 83  AEEAQH-AALEE-AKKITFSLDKSLP-EAKVIKIGESVQHRDQRV 124


>AF043697-2|AAB97556.1|  820|Caenorhabditis elegans Patched related
           family protein 11 protein.
          Length = 820

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 77  CLNLVCFIYYFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKD 220
           C+ +VCF++     AV V+ S+    C V V  +  + A L   ++ D
Sbjct: 650 CMAIVCFVFIANFNAVAVITSVIASICYVLVGGLSLWGADLDPVIQVD 697


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,900,718
Number of Sequences: 27780
Number of extensions: 328508
Number of successful extensions: 857
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)