Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_H15
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.69 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   1.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.8  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    23   2.8  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    23   2.8  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    22   6.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   8.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.5  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 0.69
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = -3

Query: 165 GLVAVRAQT---GSQENKKETRKK*SSSLNTSTRSHDFKXRLQNLKNS 31
           G+V +   T   G  E KK+ ++K S S      +H++K  +    NS
Sbjct: 416 GIVQISNMTEYNGLTEPKKDNKRKLSDSTMNKINNHEYKRSVSRESNS 463


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 471 PGPTVRIAAAPDSSCVDSRP 412
           P P  RIA+AP SS   S P
Sbjct: 511 PSPNPRIASAPSSSTSSSPP 530


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +2

Query: 122 LFSWDPVWARTATKPQEISGPITS---LSDKNARDKAKVHP 235
           + SW   W +    P  ++  +TS   LS ++A+ +A + P
Sbjct: 260 IMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPP 300


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 294 NQYPLLRRT*ENSTKEIHTSFYGRPRTVA 380
           +QYPL+RRT E+   E        P  VA
Sbjct: 556 DQYPLMRRTMESVAAERLNKIGKNPNLVA 584


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 294 NQYPLLRRT*ENSTKEIHTSFYGRPRTVA 380
           +QYPL+RRT E+   E        P  VA
Sbjct: 524 DQYPLMRRTMESVAAERLNKIGKNPNLVA 552


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 286 LYSPYLHTGCSADIGKSRMDFGFVTGV 206
           L+  ++H G    +G S +  GF  G+
Sbjct: 87  LFKGFVHLGAGLAVGFSGLAAGFAIGI 113


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 253 QNSRCANMENTE 288
           +NSRCAN +N +
Sbjct: 410 RNSRCANFDNQD 421


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 151 PCPDGIPGKQKGDT 110
           PC  G+  KQ+GDT
Sbjct: 452 PCEPGMIKKQQGDT 465


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 151 PCPDGIPGKQKGDT 110
           PC  G+  KQ+GDT
Sbjct: 542 PCEPGMIKKQQGDT 555


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,427
Number of Sequences: 438
Number of extensions: 4415
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)