Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H13
(834 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 39 0.004
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.14
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.14
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.14
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.14
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.14
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.14
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.58
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 0.77
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 0.77
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.3
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 1.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.3
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 4.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 4.1
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.1
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 29 4.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.4
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 5.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 7.2
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 39.1 bits (87), Expect = 0.004
Identities = 31/96 (32%), Positives = 32/96 (33%)
Frame = +2
Query: 350 PPXGXVLKXGXCXPRGKKXFFXPPXTPXGGXPPPXXXPPPXSPXXXPFFFFRXGGXXGXK 529
PP G +L G P K FF PP P G PPP P P P F G
Sbjct: 47 PPSG-ILPPGQSIP--KPSFFIPPPVPNGFIPPPPG--PGGIPPPPPMF----AGGIPPP 97
Query: 530 XKXXXRXSXPPPXXGXXGPXTXXXXGGFXPPPPLQK 637
PPP G P G P PP K
Sbjct: 98 PPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPK 133
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Frame = +3
Query: 378 GXAPP---VGKXXFSXPPXXXXGXNPPPXXPPPXXPPXXXXFFFLEXGGXXXXKXXFXPG 548
G PP + K F PP G PPP P PP G G
Sbjct: 50 GILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPM------FAGGIPPPPPMMGG 103
Query: 549 XPXPPPXXGRGAP 587
P PPP G P
Sbjct: 104 IPPPPPMFGAPPP 116
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +2
Query: 416 PPXTPXGGXPPPXXXPPPXSPXXXPFFFFRXGGXXGXKXKXXXRXSXPPPXXGXXGPXTX 595
PP P GG PP PPP P G PPP G P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPP------------PGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 596 XXXGGF--XPPPP 628
GGF PPPP
Sbjct: 775 PPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +2
Query: 416 PPXTPXGGXPPPXXXPPPXSPXXXPFFFFRXGGXXGXKXKXXXRXSXPPPXXGXXGPXTX 595
PP P GG PP PPP P G PPP G P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPP------------PGGLPPISGGPPPPPPPPGGCPPPPPP 774
Query: 596 XXXGGF--XPPPP 628
GGF PPPP
Sbjct: 775 PPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +2
Query: 416 PPXTPXGGXPPPXXXPPPXSPXXXPFFFFRXGGXXGXKXKXXXRXSXPPPXXGXXGPXTX 595
PP P GG PP PPP P G PPP G P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPP------------PGGLPPISGGPPPPPPPPGGCPPPPPP 357
Query: 596 XXXGGF--XPPPP 628
GGF PPPP
Sbjct: 358 PPPGGFKGGPPPP 370
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.14
Identities = 30/104 (28%), Positives = 31/104 (29%), Gaps = 2/104 (1%)
Frame = +2
Query: 335 PIXXXPPXGXVLKXGXCXPRGKKXFFXPPXTPXGGXPPPXXXPPPXSPXXXPFFFFRXGG 514
P PP G G P PP G PPP PP P R G
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 515 XXGXKXK--XXXRXSXPPPXXGXXGPXTXXXXGGFXPPPPLQKK 640
S PPP G P G PPPP QK+
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPPRQKR 337
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/74 (32%), Positives = 26/74 (35%)
Frame = +3
Query: 387 PPVGKXXFSXPPXXXXGXNPPPXXPPPXXPPXXXXFFFLEXGGXXXXKXXFXPGXPXPPP 566
PP G PP G PPP PPP P + GG G P PPP
Sbjct: 283 PPAG----GSPPPPRAGSPPPP--PPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPP 333
Query: 567 XXGRGAPKHXXXGG 608
R AP+ G
Sbjct: 334 RQKRQAPERSPPTG 347
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.14
Identities = 30/104 (28%), Positives = 31/104 (29%), Gaps = 2/104 (1%)
Frame = +2
Query: 335 PIXXXPPXGXVLKXGXCXPRGKKXFFXPPXTPXGGXPPPXXXPPPXSPXXXPFFFFRXGG 514
P PP G G P PP G PPP PP P R G
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 515 XXGXKXK--XXXRXSXPPPXXGXXGPXTXXXXGGFXPPPPLQKK 640
S PPP G P G PPPP QK+
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPPRQKR 358
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/74 (32%), Positives = 26/74 (35%)
Frame = +3
Query: 387 PPVGKXXFSXPPXXXXGXNPPPXXPPPXXPPXXXXFFFLEXGGXXXXKXXFXPGXPXPPP 566
PP G PP G PPP PPP P + GG G P PPP
Sbjct: 304 PPAG----GSPPPPRAGSPPPP--PPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPP 354
Query: 567 XXGRGAPKHXXXGG 608
R AP+ G
Sbjct: 355 RQKRQAPERSPPTG 368
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.14
Identities = 30/104 (28%), Positives = 31/104 (29%), Gaps = 2/104 (1%)
Frame = +2
Query: 335 PIXXXPPXGXVLKXGXCXPRGKKXFFXPPXTPXGGXPPPXXXPPPXSPXXXPFFFFRXGG 514
P PP G G P PP G PPP PP P R G
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 515 XXGXKXK--XXXRXSXPPPXXGXXGPXTXXXXGGFXPPPPLQKK 640
S PPP G P G PPPP QK+
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPPRQKR 343
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/74 (32%), Positives = 26/74 (35%)
Frame = +3
Query: 387 PPVGKXXFSXPPXXXXGXNPPPXXPPPXXPPXXXXFFFLEXGGXXXXKXXFXPGXPXPPP 566
PP G PP G PPP PPP P + GG G P PPP
Sbjct: 289 PPAG----GSPPPPRAGSPPPP--PPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPP 339
Query: 567 XXGRGAPKHXXXGG 608
R AP+ G
Sbjct: 340 RQKRQAPERSPPTG 353
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/106 (23%), Positives = 33/106 (31%), Gaps = 1/106 (0%)
Frame = +2
Query: 314 PKKKKXXPIXXXPPXGXVLKXGXCXPRGKKXFFXPPXTPXGGXPPPXXXPP-PXSPXXXP 490
P +++ PP G + P+G PP G PP P P S P
Sbjct: 310 PPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQG-GPPQGSFGAPPPQQFHAPSPQSFGGPP 368
Query: 491 FFFFRXGGXXGXKXKXXXRXSXPPPXXGXXGPXTXXXXGGFXPPPP 628
G + + PP P GG+ PPPP
Sbjct: 369 PPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPP 414
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/102 (27%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Frame = +2
Query: 350 PPXGXVLKXGXCXPRGKKXFFXPPXTPXGGXPPPXXXPP----PXSPXXXPFFFFRXGGX 517
PP G + P ++ F P GG PPP P P P F
Sbjct: 338 PPQGGPPQGSFGAPPPQQ-FHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSA 396
Query: 518 XGX-KXKXXXRXSXPPPXXGXXGPXTXXXX----GGFXPPPP 628
G + PPP G P + GGF PPPP
Sbjct: 397 FGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/86 (31%), Positives = 28/86 (32%), Gaps = 7/86 (8%)
Frame = +3
Query: 351 PPWGKF*KXGXAPPVGKXXFSXPPXXXXGXNPPPXX-------PPPXXPPXXXXFFFLEX 509
PP G F G PP F P G PPP PPP P F
Sbjct: 343 PPQGSF---GAPPP---QQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGA--FAPPP 394
Query: 510 GGXXXXKXXFXPGXPXPPPXXGRGAP 587
+ PG PPP G GAP
Sbjct: 395 SAFGAPQGPGGPGGYGPPPPGGPGAP 420
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 379 GXXPPWEKXXFPPPXXXXXGX--TPPXXXPPPXFPQXXPXFF 498
G PP + FPPP G PP PPP F P F
Sbjct: 294 GFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGF 335
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 379 GXXPPWEKXXFPPPXXXXXGX--TPPXXXPPPXFPQXXPXFF 498
G PP + FPPP G PP PPP F P F
Sbjct: 294 GFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGF 335
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 478 GGXXGGGXXGGGXXPXXXXGGXEKXFFPTGGAXPXF*NXPXGG 350
GG GGG GGG GG + + P+GG + P GG
Sbjct: 198 GGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGY--GPGGG 238
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Frame = +2
Query: 416 PPXTPXGGXPPPXXXPPPXSPXXXPFFFFRXGGXXGXKXKXXXRXSXPPPXXGXXGPXT- 592
PP P G PP PPP P G G PP G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPP-------GMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Query: 593 -XXXXGGFXPPPP 628
GG PPPP
Sbjct: 340 GMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Frame = +2
Query: 416 PPXTPXGGXPPPXXXPPPXSPXXXPFFFFRXGGXXGXKXKXXXRXSXPPPXXGXXGPXT- 592
PP P G PP PPP P G G PP G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPP-------GMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Query: 593 -XXXXGGFXPPPP 628
GG PPPP
Sbjct: 350 GMRYPGGMPPPPP 362
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 379 GXXPPWEKXXFPPPXXXXXGXTPPXXXPPP 468
G PPW + PPP G PP PPP
Sbjct: 39 GPPPPWHRNRGPPP----FGPPPPWDRPPP 64
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 488 GXXWGXXGGGXXWGGVXPXXXXXGGGKXXFSHGG 387
G WG GGG WGG GGG+ GG
Sbjct: 69 GGGWGNNGGGGNWGG-NGGGGNGGGGRGGGGGGG 101
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -2
Query: 488 GXXWGXXGGGXXWGGVXPXXXXXGGGKXXFSHGG 387
G WG GGG WGG GG + G
Sbjct: 52 GPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNG 85
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 478 GGXXGGGXXGGGXXPXXXXGGXEKXFFPTGGAXP 377
GG GGG GGG GG P GGA P
Sbjct: 481 GGGGGGGGFGGGGGGFGGGGGGFGSGSPFGGAAP 514
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 389 PRGKKXFFXPPXTPXGGXPPPXXXPPPXSP 478
P G + PP G PPP PPP +P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 389 PRGKKXFFXPPXTPXGGXPPPXXXPPPXSP 478
P G + PP G PPP PPP +P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 389 PRGKKXFFXPPXTPXGGXPPPXXXPPPXSP 478
P G + PP G PPP PPP +P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 389 PRGKKXFFXPPXTPXGGXPPPXXXPPPXSP 478
P G + PP G PPP PPP +P
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/91 (29%), Positives = 29/91 (31%), Gaps = 11/91 (12%)
Frame = +2
Query: 389 PRGKKXFFXPPXTPXGGXPPPXXXPP-PXSPXXXPFFFFRXGGXXGXKXKXXXR-----X 550
P G + P P G PPP PP P P F+ G G R
Sbjct: 709 PPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMS 768
Query: 551 SXPPPXXG-----XXGPXTXXXXGGFXPPPP 628
S PPP G P GG PPP
Sbjct: 769 SFPPPPRGGMHHMPPPPSFRGGRGGHGGPPP 799
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = +3
Query: 444 PPPXXPPPXXPPXXXXFFFLEXGGXXXXKXXFXPGXPXPPPXXGRG 581
PPP PPP PP ++ + P P PPP +G
Sbjct: 315 PPPPIPPPIQPPPYS--YYPVAPAAAPQVYHYAPPPPPPPPHPQQG 358
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 372 KXGXAPPVGKXXFSXPPXXXXGXNPPPXXPPPXXPP 479
+ G PP G PP G P PPP PP
Sbjct: 1570 RGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPP 1605
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 384 APPVGKXXFSXPPXXXXGXNPPPXXPPPXXPP 479
AP +GK + PP +P P PPP PP
Sbjct: 286 APDIGKTLSTQPPRRTPQPHPKP--PPPPPPP 315
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +3
Query: 351 PPWGKF*KXGXAPPVGKXXFSXPPXXXXGXNPPPXXPPPXXPP 479
PP K G +PP PP PPP PPP PP
Sbjct: 126 PPPRKSRAGGSSPP-------PPPPPRVPRTPPPRSPPPRRPP 161
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 416 PPXTPXGGXPPPXXXPPPXSPXXXP 490
PP P PPP PPP P P
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +3
Query: 387 PPVGKXXFSXPPXXXXGXNPPPXXP--PPXXPP 479
PP+ F PP PPP P PP PP
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 417 PPXXXXGXNPPPXXPPPXXPPXXXXF 494
PP PPP PPP PP F
Sbjct: 778 PPFFALPVPPPPPVPPPPPPPFLTCF 803
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,766,896
Number of Sequences: 27780
Number of extensions: 274097
Number of successful extensions: 2138
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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