Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H10
(945 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.3
07_01_0479 + 3606663-3607448 30 2.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 3.1
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 3.1
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 29 4.1
03_01_0515 - 3864796-3865425 29 4.1
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 29 4.1
10_08_1037 - 22477358-22478752 29 5.4
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 29 5.4
01_03_0005 + 11568545-11569119,11569179-11569191 29 5.4
10_08_0493 + 18299885-18299892,18300201-18300837,18301254-183016... 28 9.4
09_02_0603 - 11150739-11150746,11150791-11151340 28 9.4
02_05_0584 - 30135768-30135790,30136104-30136866 28 9.4
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPPXXPXXG 550
PP + G PPP G PPP P G
Sbjct: 347 PPPAKGPPPPPPPKGPSPPPPPPPGG 372
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPP 568
PP G PPPA G PPP
Sbjct: 338 PPPPKGPPPPPPAKGPPPPP 357
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 545 PXPXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTF-FXPPXPKRPXPPXP 688
P P G G PP G V P PGG P PP P RP P P
Sbjct: 201 PPPPPGPFMRGP-PPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPP 248
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -1
Query: 627 PPGSXGXTXPPPA-GGXXPPPXXPXXGXGV 541
P G G T PP A GG PPP P GV
Sbjct: 1166 PAGFRGGTPPPNAHGGVAPPPPPPRGHGGV 1195
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPPXXP 559
P G G PPP GG PP P
Sbjct: 1142 PEGIGGVPPPPPVGGLGGPPAPP 1164
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPPXXPXXGXG 544
P G PPP GG PPP P G
Sbjct: 288 PMGMPPRIPPPPVGGTQPPPPPPPLANG 315
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +2
Query: 545 PXPXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXP 679
P P G G PP GGG + P P G P F P P P P
Sbjct: 235 PFPPPSLPGVG--PPRGGGAI-PGLPAGFP---FLLRPPPPLPVP 273
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 584 PPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPPXP 688
PP G + P P P T PP P P PP P
Sbjct: 62 PPPAAGPLMPPPPPP-PSVTSSPPPPPLPPPPPPP 95
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 876 GXPXGGXTGGXPRGGXXGEAPG 811
G P GG GG P GG G PG
Sbjct: 535 GMPGGGFPGGMPGGGFPGGMPG 556
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 876 GXPXGGXTGGXPRGGXXGEAPG 811
G P GG GG P GG G PG
Sbjct: 544 GMPGGGFPGGMPGGGFPGGMPG 565
>10_08_1037 - 22477358-22478752
Length = 464
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 542 TPXPXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXP 655
+P P G G G P G FP P GL + F P
Sbjct: 418 SPLPGTGILGPGPMAPPSPGLWFPQSPSGLLSPSGFLP 455
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 587 PAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPPXP 688
P G G P PG P PP P P PP P
Sbjct: 236 PPGQGFNSPPPPGQGPVLPRDAPPMPPPPSPPNP 269
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 545 PXPXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPP 682
P G GGG GGG +P P P +F P P PP
Sbjct: 116 PTGGGGGGGGGWQQGGGGGGAYPTPPPPNPFLPYF-PFYYYSPPPP 160
>10_08_0493 +
18299885-18299892,18300201-18300837,18301254-18301676,
18301769-18302014,18302124-18302789,18303228-18303283,
18303367-18303460,18303559-18303738
Length = 769
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 815 GASPXXPPRGXPPVXPPXGXP 877
G P PP G P + PP G P
Sbjct: 503 GGPPNDPPYGRPAIDPPYGRP 523
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = +2
Query: 572 GGXXPPAGGGXVFPXXPGGLPXX----TFFXPPXPKRPXPPXP 688
G PP G P G+P +FF PP R PP P
Sbjct: 42 GFPPPPPPGSTFVPLPQSGVPPPPPLGSFFVPPPQSRVPPPPP 84
>02_05_0584 - 30135768-30135790,30136104-30136866
Length = 261
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 545 PXPXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPP 682
P P G G P +G G FP P LP + P PK P
Sbjct: 131 PLPAHGSPAAGAPPSSGSGLPFP-LPFPLPQPSSPAQPQPKECMTP 175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,490,758
Number of Sequences: 37544
Number of extensions: 208149
Number of successful extensions: 1667
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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