Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H10
(945 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.074
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.074
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.074
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.69
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.69
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.69
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.1
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 30 2.1
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 3.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 6.4
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 6.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.074
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 575 GXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRP--XPPXP 688
G PP GG P PGGLP + PP P P PP P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 633 GRPPGSXGXTXPPPAGGXXPPPXXPXXGXG 544
G PP S G PPP G PPP P G
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 584 PPAGGGXVFPXXPGGLPXXTFFXPPXP 664
PP GG P PGGLP T PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 542 TPXPXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPPXP 688
T P GG P +GG P PGG P PP + PP P
Sbjct: 739 TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -1
Query: 633 GRPPGSXGXTXPPPAGGXXP----PPXXPXXG 550
G PP + G PPP GG P PP P G
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.074
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 575 GXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRP--XPPXP 688
G PP GG P PGGLP + PP P P PP P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 633 GRPPGSXGXTXPPPAGGXXPPPXXPXXGXG 544
G PP S G PPP G PPP P G
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 584 PPAGGGXVFPXXPGGLPXXTFFXPPXP 664
PP GG P PGGLP T PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 542 TPXPXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPPXP 688
T P GG P +GG P PGG P PP + PP P
Sbjct: 739 TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -1
Query: 633 GRPPGSXGXTXPPPAGGXXP----PPXXPXXG 550
G PP + G PPP GG P PP P G
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.074
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 575 GXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRP--XPPXP 688
G PP GG P PGGLP + PP P P PP P
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 31.9 bits (69), Expect = 0.69
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 633 GRPPGSXGXTXPPPAGGXXPPPXXPXXGXG 544
G PP S G PPP G PPP P G
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 584 PPAGGGXVFPXXPGGLPXXTFFXPPXP 664
PP GG P PGGLP T PP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPP 329
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +2
Query: 542 TPXPXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPPXP 688
T P GG P +GG P PGG P PP + PP P
Sbjct: 322 TGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -1
Query: 633 GRPPGSXGXTXPPPAGGXXP----PPXXPXXG 550
G PP + G PPP GG P PP P G
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPP 568
PP G PPPAGG PPP
Sbjct: 273 PPPPTGSPPPPPAGGSPPPP 292
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPPXXP 559
PP G + PPP G PPP P
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPP 303
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = -1
Query: 633 GRPP-GSXGXTXPPPAGGXXPPP 568
G PP G PPPA G PPP
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPP 267
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPP 568
PP G PPPAGG PPP
Sbjct: 294 PPPPTGSPPPPPAGGSPPPP 313
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPPXXP 559
PP G + PPP G PPP P
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPP 324
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = -1
Query: 633 GRPP-GSXGXTXPPPAGGXXPPP 568
G PP G PPPA G PPP
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPP 288
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPP 568
PP G PPPAGG PPP
Sbjct: 279 PPPPTGSPPPPPAGGSPPPP 298
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPPXXP 559
PP G + PPP G PPP P
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPP 309
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = -1
Query: 633 GRPP-GSXGXTXPPPAGGXXPPP 568
G PP G PPPA G PPP
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPP 273
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 639 FXGRPPGSXGXTXPPP--AGGXXPPP 568
F PPG G PPP AGG PPP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPP 98
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 627 PPGSXGXTXPPPAGGXXPPPXXPXXGXGV 541
PP G PPP PPP P G GV
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPPPPSGLGV 125
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 551 PXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPPXP 688
P GG P G P P G P T + P P RP PP P
Sbjct: 180 PGGPGEGGDGGRPGNPGRPGPAGPRGEPG-TEYKPGQPGRPGPPGP 224
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +2
Query: 542 TPXPXXGXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPPXP 688
TP P G G P A G P P GLP PP +P PP P
Sbjct: 117 TPGPA-GRPGKPGRPGACGNHGNPGKPTGLPCDPVTVPPC--KPCPPGP 162
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 624 PGSXGXTXPPPAGGXXPPPXXPXXG 550
PG PPP+ G PPP P G
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPG 305
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Frame = -1
Query: 627 PPGSXGXTXPPPAG----GXXPPPXXP 559
PPG G PPP G G PPP P
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 569 GGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPPXP 688
GGG + GG GG PP P P PP P
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAP 314
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 569 GGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXPKRPXPPXP 688
GGG + GG GG PP P P PP P
Sbjct: 275 GGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAP 314
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 624 PGSXGXTXPPPAGGXXPPPXXPXXG 550
PG PPP+ G PPP P G
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPG 315
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Frame = -1
Query: 627 PPGSXGXTXPPPAG----GXXPPPXXP 559
PPG G PPP G G PPP P
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 560 GXXGGGXXPPAGGGXVFPXXPGGLPXXTFFXPPXP 664
G GGG +GG F P LP ++ PP P
Sbjct: 127 GGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPPP 161
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 639 FXGRPPGSXGXTXPPPAGGXXPPP 568
F PPG+ G PPP PPP
Sbjct: 363 FQTGPPGNLGRNGPPPFQAGVPPP 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,324,466
Number of Sequences: 27780
Number of extensions: 127593
Number of successful extensions: 1301
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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