Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_H09
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0995 + 33377933-33378000,33378099-33378327,33378410-33378451     38   0.015
05_07_0069 + 27475072-27475136,27475237-27475465,27475532-274756...    37   0.026
05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009     37   0.026
11_03_0067 - 9535565-9536157,9536446-9536757,9536948-9537212,953...    29   5.2  
09_02_0410 - 8672855-8672970,8673062-8673265,8673618-8673768,867...    28   9.0  

>02_05_0995 + 33377933-33378000,33378099-33378327,33378410-33378451
          Length = 112

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +1

Query: 262 KRGLRNQHENTAL--LKG*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLR 435
           KR   NQ+ENT+L  ++G  +K            +A  C + R  + +           R
Sbjct: 22  KRSKSNQYENTSLVQIEGVNTKE----------EVAWYCGK-RMAYVYKAKTKSGGTNYR 70

Query: 436 AIWGKVTRPHGHSG 477
            IWGKVTRPHG+SG
Sbjct: 71  CIWGKVTRPHGNSG 84


>05_07_0069 +
           27475072-27475136,27475237-27475465,27475532-27475630,
           27476172-27476287,27476670-27476757
          Length = 198

 Score = 36.7 bits (81), Expect = 0.026
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = +1

Query: 262 KRGLRNQHENTALLK--G*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLR 435
           KR   NQ+ENT+LL+  G  +K       + W +        R  + +        + +R
Sbjct: 21  KRSKSNQYENTSLLQIEGVNTKEE-----VGWYA------GKRIAYVYKAKTKSNDSTIR 69

Query: 436 AIWGKVTRPHGHSG 477
            IWGKVTRPHG+SG
Sbjct: 70  CIWGKVTRPHGNSG 83


>05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009
          Length = 111

 Score = 36.7 bits (81), Expect = 0.026
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = +1

Query: 262 KRGLRNQHENTALLK--G*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLR 435
           KR   NQ+ENT+LL+  G  +K       + W +        R  + +        + +R
Sbjct: 21  KRSKSNQYENTSLLQIEGVNTKEE-----VGWYA------GKRIAYVYKAKTKSNDSTIR 69

Query: 436 AIWGKVTRPHGHSG 477
            IWGKVTRPHG+SG
Sbjct: 70  CIWGKVTRPHGNSG 83


>11_03_0067 -
           9535565-9536157,9536446-9536757,9536948-9537212,
           9537810-9538048,9538400-9538568,9539216-9539410,
           9539649-9539766,9542140-9542315
          Length = 688

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 156 QGLLQQLLVEPTKVLRKASKPRHGRLYAKAVFTGYK 263
           Q LL QL  EP    R A + +  +LY +AVFT +K
Sbjct: 396 QCLLLQLQCEPVLSTRYAFEEQLSKLYTRAVFTLFK 431


>09_02_0410 -
           8672855-8672970,8673062-8673265,8673618-8673768,
           8674060-8674119,8675019-8675024
          Length = 178

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 351 GKHCVYVYRAKKRTPIPGSSRGQKKPAACYLGQGDPP 461
           G+HC Y  R +K  P    S   ++P   +L +  PP
Sbjct: 125 GRHCSYFRRCRKADPSGILSNRSREPEFVWLEEHQPP 161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,762,875
Number of Sequences: 37544
Number of extensions: 347702
Number of successful extensions: 744
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)