Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H09
(914 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a ... 50 1e-05
X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for ... 49 2e-05
BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a ... 49 2e-05
BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein. 49 2e-05
BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a ... 49 2e-05
BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a ... 49 2e-05
AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting ... 49 2e-05
AB209034-1|BAD92271.1| 713|Homo sapiens Paxillin variant protein. 32 3.3
>AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a
pseudogene 3 protein.
Length = 96
Score = 50.0 bits (114), Expect = 1e-05
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +3
Query: 225 GRLYAKAVFTGYKAWSTQPAREHRSPQGLKEQKTVMMQSFMLGKHCVYVYRAKKRTPIPG 404
GRL++K+ F GYK S Q REH + ++ F LGK C VY+AK T IPG
Sbjct: 2 GRLWSKSFFAGYKR-SLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG 60
Query: 405 SSRGQKK 425
S + +
Sbjct: 61 SKPNKSR 67
Score = 39.9 bits (89), Expect = 0.013
Identities = 26/72 (36%), Positives = 34/72 (47%)
Frame = +1
Query: 262 KRGLRNQHENTALLKG*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLRAI 441
KR L+NQ E+TALLK + C + + +P K N+ R I
Sbjct: 14 KRSLQNQREHTALLKIEGGYAQDETEFY----LGKRCACVYKAKSNTMIPGSKPNKSRVI 69
Query: 442 WGKVTRPHGHSG 477
WGKVTR H +SG
Sbjct: 70 WGKVTRAHRNSG 81
>X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for
ribosomal protein L35a. ).
Length = 110
Score = 49.2 bits (112), Expect = 2e-05
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 262 KRGLRNQHENTALLK--G*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLR 435
KRGLRNQ E+TALLK G ++ + C + + P GK N+ R
Sbjct: 15 KRGLRNQREHTALLKIEGVYARDE------TEFYLGKRCAYVYKAKNNTVTPGGKPNKTR 68
Query: 436 AIWGKVTRPHGHSG 477
IWGKVTR HG+SG
Sbjct: 69 VIWGKVTRAHGNSG 82
Score = 48.8 bits (111), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 225 GRLYAKAVFTGYKAWSTQPAREHRSPQGLKEQKTVMMQSFMLGKHCVYVYRAKKRTPIPG 404
GRL++KA+F GYK + REH + ++ F LGK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKR-GLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG 61
>BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 49.2 bits (112), Expect = 2e-05
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 262 KRGLRNQHENTALLK--G*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLR 435
KRGLRNQ E+TALLK G ++ + C + + P GK N+ R
Sbjct: 15 KRGLRNQREHTALLKIEGVYARDE------TEFYLGKRCAYVYKAKNNTVTPGGKPNKTR 68
Query: 436 AIWGKVTRPHGHSG 477
IWGKVTR HG+SG
Sbjct: 69 VIWGKVTRAHGNSG 82
Score = 48.8 bits (111), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 225 GRLYAKAVFTGYKAWSTQPAREHRSPQGLKEQKTVMMQSFMLGKHCVYVYRAKKRTPIPG 404
GRL++KA+F GYK + REH + ++ F LGK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKR-GLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG 61
>BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein.
Length = 110
Score = 49.2 bits (112), Expect = 2e-05
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 262 KRGLRNQHENTALLK--G*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLR 435
KRGLRNQ E+TALLK G ++ + C + + P GK N+ R
Sbjct: 15 KRGLRNQREHTALLKIEGVYARDE------TEFYLGKRCAYVYKAKNNTVTPGGKPNKTR 68
Query: 436 AIWGKVTRPHGHSG 477
IWGKVTR HG+SG
Sbjct: 69 VIWGKVTRAHGNSG 82
Score = 48.8 bits (111), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 225 GRLYAKAVFTGYKAWSTQPAREHRSPQGLKEQKTVMMQSFMLGKHCVYVYRAKKRTPIPG 404
GRL++KA+F GYK + REH + ++ F LGK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKR-GLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG 61
>BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 49.2 bits (112), Expect = 2e-05
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 262 KRGLRNQHENTALLK--G*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLR 435
KRGLRNQ E+TALLK G ++ + C + + P GK N+ R
Sbjct: 15 KRGLRNQREHTALLKIEGVYARDE------TEFYLGKRCAYVYKAKNNTVTPGGKPNKTR 68
Query: 436 AIWGKVTRPHGHSG 477
IWGKVTR HG+SG
Sbjct: 69 VIWGKVTRAHGNSG 82
Score = 48.8 bits (111), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 225 GRLYAKAVFTGYKAWSTQPAREHRSPQGLKEQKTVMMQSFMLGKHCVYVYRAKKRTPIPG 404
GRL++KA+F GYK + REH + ++ F LGK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKR-GLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG 61
>BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 49.2 bits (112), Expect = 2e-05
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 262 KRGLRNQHENTALLK--G*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLR 435
KRGLRNQ E+TALLK G ++ + C + + P GK N+ R
Sbjct: 15 KRGLRNQREHTALLKIEGVYARDE------TEFYLGKRCAYVYKAKNNTVTPGGKPNKTR 68
Query: 436 AIWGKVTRPHGHSG 477
IWGKVTR HG+SG
Sbjct: 69 VIWGKVTRAHGNSG 82
Score = 48.8 bits (111), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 225 GRLYAKAVFTGYKAWSTQPAREHRSPQGLKEQKTVMMQSFMLGKHCVYVYRAKKRTPIPG 404
GRL++KA+F GYK + REH + ++ F LGK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKR-GLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG 61
>AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting
protein 33 protein.
Length = 110
Score = 49.2 bits (112), Expect = 2e-05
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 262 KRGLRNQHENTALLK--G*RSKRP**CSLLCWASIASMCTELRRGHQFPGVPVGKKNQLR 435
KRGLRNQ E+TALLK G ++ + C + + P GK N+ R
Sbjct: 15 KRGLRNQREHTALLKIEGVYARDE------TEFYLGKRCAYVYKAKNNTVTPGGKPNKTR 68
Query: 436 AIWGKVTRPHGHSG 477
IWGKVTR HG+SG
Sbjct: 69 VIWGKVTRAHGNSG 82
Score = 48.8 bits (111), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 225 GRLYAKAVFTGYKAWSTQPAREHRSPQGLKEQKTVMMQSFMLGKHCVYVYRAKKRTPIPG 404
GRL++KA+F GYK + REH + ++ F LGK C YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKR-GLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG 61
>AB209034-1|BAD92271.1| 713|Homo sapiens Paxillin variant protein.
Length = 713
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = -1
Query: 491 GSGHCPEWPC----GRVTLPQIARSWFFL 417
G GH PE+PC GR LP +A SW L
Sbjct: 330 GQGHTPEFPCTEQSGRGLLPPVAPSWLDL 358
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,479,699
Number of Sequences: 237096
Number of extensions: 1998663
Number of successful extensions: 7268
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7252
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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