Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H07
(1113 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 31 5.7
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 31 5.7
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 31 5.7
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 31 5.7
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 31 5.7
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 31 5.7
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 31 5.7
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 31 5.7
AB015336-1|BAA34794.1| 376|Homo sapiens HRIHFB2091 protein. 31 5.7
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 734 KNFWGGXGPNXXLLNFWXXPPFLXXGPGEIKTXXVFXPXPNTKXGXXSPPFLXGGXPTXG 913
+NF G G F PP L PG + F P P G P GG P G
Sbjct: 790 QNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG--PGPGPGPIHIGGPP--G 845
Query: 914 FPXGGGK 934
F GK
Sbjct: 846 FASSSGK 852
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 734 KNFWGGXGPNXXLLNFWXXPPFLXXGPGEIKTXXVFXPXPNTKXGXXSPPFLXGGXPTXG 913
+NF G G F PP L PG + F P P G P GG P G
Sbjct: 790 QNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG--PGPGPGPIHIGGPP--G 845
Query: 914 FPXGGGK 934
F GK
Sbjct: 846 FASSSGK 852
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 734 KNFWGGXGPNXXLLNFWXXPPFLXXGPGEIKTXXVFXPXPNTKXGXXSPPFLXGGXPTXG 913
+NF G G F PP L PG + F P P G P GG P G
Sbjct: 790 QNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG--PGPGPGPIHIGGPP--G 845
Query: 914 FPXGGGK 934
F GK
Sbjct: 846 FASSSGK 852
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 734 KNFWGGXGPNXXLLNFWXXPPFLXXGPGEIKTXXVFXPXPNTKXGXXSPPFLXGGXPTXG 913
+NF G G F PP L PG + F P P G P GG P G
Sbjct: 790 QNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG--PGPGPGPIHIGGPP--G 845
Query: 914 FPXGGGK 934
F GK
Sbjct: 846 FASSSGK 852
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 734 KNFWGGXGPNXXLLNFWXXPPFLXXGPGEIKTXXVFXPXPNTKXGXXSPPFLXGGXPTXG 913
+NF G G F PP L PG + F P P G P GG P G
Sbjct: 790 QNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG--PGPGPGPIHIGGPP--G 845
Query: 914 FPXGGGK 934
F GK
Sbjct: 846 FASSSGK 852
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 734 KNFWGGXGPNXXLLNFWXXPPFLXXGPGEIKTXXVFXPXPNTKXGXXSPPFLXGGXPTXG 913
+NF G G F PP L PG + F P P G P GG P G
Sbjct: 790 QNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG--PGPGPGPIHIGGPP--G 845
Query: 914 FPXGGGK 934
F GK
Sbjct: 846 FASSSGK 852
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 734 KNFWGGXGPNXXLLNFWXXPPFLXXGPGEIKTXXVFXPXPNTKXGXXSPPFLXGGXPTXG 913
+NF G G F PP L PG + F P P G P GG P G
Sbjct: 790 QNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG--PGPGPGPIHIGGPP--G 845
Query: 914 FPXGGGK 934
F GK
Sbjct: 846 FASSSGK 852
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 734 KNFWGGXGPNXXLLNFWXXPPFLXXGPGEIKTXXVFXPXPNTKXGXXSPPFLXGGXPTXG 913
+NF G G F PP L PG + F P P G P GG P G
Sbjct: 810 QNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG--PGPGPGPIHIGGPP--G 865
Query: 914 FPXGGGK 934
F GK
Sbjct: 866 FASSSGK 872
>AB015336-1|BAA34794.1| 376|Homo sapiens HRIHFB2091 protein.
Length = 376
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 734 KNFWGGXGPNXXLLNFWXXPPFLXXGPGEIKTXXVFXPXPNTKXGXXSPPFLXGGXPTXG 913
+NF G G F PP L PG + F P P G P GG P G
Sbjct: 234 QNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGPGPG--PGPGPGPIHIGGPP--G 289
Query: 914 FPXGGGK 934
F GK
Sbjct: 290 FASSSGK 296
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,843,149
Number of Sequences: 237096
Number of extensions: 1695951
Number of successful extensions: 1972
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1954
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15424047954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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