Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H06
(1281 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 31 1.5
08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251... 31 2.6
01_01_0046 - 331758-332627 31 2.6
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 30 4.5
07_03_0820 - 21749477-21749866,21751192-21751590 30 4.5
07_01_0714 - 5451246-5451408,5453401-5453534,5453608-5453796,545... 30 4.5
02_04_0563 - 23895573-23895614,23896330-23896390,23896901-238970... 30 4.5
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 6.0
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 6.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.0
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 29 6.0
10_06_0180 + 11526139-11526172,11526365-11527218 29 7.9
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 7.9
05_01_0380 + 2978256-2979284 29 7.9
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 29 7.9
03_05_0269 - 22545925-22546554,22546663-22547010,22547447-22547797 29 7.9
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 61 RVGXPXGXXPPXXXPPPPPP 2
RVG P G P PPPPPP
Sbjct: 23 RVGDPYGDGMPPPLPPPPPP 42
>08_02_1063 +
24024030-24024506,24024803-24024856,24024965-24025118,
24025314-24025388,24025511-24025788,24026023-24026253,
24026522-24026620,24026740-24026889,24027830-24027976,
24028525-24028575,24028647-24028819,24029018-24029147,
24029361-24029458,24029655-24029892,24030634-24030837,
24031003-24031083,24031296-24031535
Length = 959
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 3 GGGGGGXXXGGXXPXGXPTRFRLTTGTXVRIEXAG 107
GGGGGG GG G R R + GT V E +G
Sbjct: 114 GGGGGGDGGGGGGGGGGWKRPRASQGTAVAEEASG 148
>01_01_0046 - 331758-332627
Length = 289
Score = 30.7 bits (66), Expect = 2.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 56 WXPLXXXPPXXXPPPPPP 3
W P PP PPPPPP
Sbjct: 14 WFPYWTSPPPPPPPPPPP 31
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 64 KRVGXPXGXXPPXXXPPPPPP 2
KR P PP PPPPPP
Sbjct: 254 KRAPPPQSVRPPPPPPPPPPP 274
>07_03_0820 - 21749477-21749866,21751192-21751590
Length = 262
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 80 SRSXSKASWXPLXXXPPXXXPPPPPP 3
S S S +S L PP PPPPPP
Sbjct: 26 SPSSSSSSTHSLLPRPPALWPPPPPP 51
>07_01_0714 -
5451246-5451408,5453401-5453534,5453608-5453796,
5454313-5454825,5455815-5456856,5457283-5457380,
5458224-5458451
Length = 788
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 1 GGGGGGGXXXGGXXXRGXQLA 63
GGGGGGG GG G QLA
Sbjct: 29 GGGGGGGGGGGGGGDGGVQLA 49
>02_04_0563 -
23895573-23895614,23896330-23896390,23896901-23897025,
23897217-23897302,23898052-23898167,23898274-23898336,
23898451-23898530,23898751-23898871,23899419-23899501,
23900081-23900155,23900436-23900936
Length = 450
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 3 GGGGGGXXXGGXXPXGXPTRFRL 71
GGGGGG GG PTRF L
Sbjct: 42 GGGGGGGGGGGGGGGARPTRFGL 64
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 29.5 bits (63), Expect = 6.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 74 SXSKASWXPLXXXPPXXXPPPPPP 3
S +A W P PP P PPPP
Sbjct: 13 SPGEAEWPPELRLPPPPPPHPPPP 36
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.5 bits (63), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 64 KRVGXPXGXXPPXXXPPPPPP 2
K++ P PP PPPPPP
Sbjct: 318 KQMASPPSNPPPAPPPPPPPP 338
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 6.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 49 PXGXXPPXXXPPPPPP 2
P G PP PPPPPP
Sbjct: 44 PQGAPPPFLAPPPPPP 59
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 79 PVVSLKRVGXPXGXXPPXXXPPPPP 5
P+VS G P PP PPPPP
Sbjct: 203 PLVSSPAPGTPVTPQPPPPPPPPPP 227
>10_06_0180 + 11526139-11526172,11526365-11527218
Length = 295
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 1 GGGGGGGXXXGGXXXRGXQLALDXLR 78
GGGGGGG GG + +LA + +R
Sbjct: 40 GGGGGGGGGGGGLGEKKRRLAAEQVR 65
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 7.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 74 SXSKASWXPLXXXPPXXXPPPPPP 3
S S PL PP PPPPPP
Sbjct: 1151 SDSPPCQPPLPPSPPPATPPPPPP 1174
>05_01_0380 + 2978256-2979284
Length = 342
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 64 KRVGXPXGXXPPXXXPPPPPP 2
+RV P PP PPPPPP
Sbjct: 21 ERVRMPPPPPPPPPPPPPPPP 41
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 65 KASWXPLXXXPPXXXPPPPPP 3
K S P PP PPPPPP
Sbjct: 387 KTSCGPAVPPPPPPTPPPPPP 407
>03_05_0269 - 22545925-22546554,22546663-22547010,22547447-22547797
Length = 442
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 240 GRGXGXSPXXXWVGVXGXXGXRGSRXEAWGPXSRGXXPR 356
G G G G G G RG R E WG RG R
Sbjct: 28 GEGGGGGGGGGGGGGGGGRGARGRRGEGWGQWVRGQLSR 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,780,722
Number of Sequences: 37544
Number of extensions: 218928
Number of successful extensions: 13064
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6779
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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