Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_H06
         (1281 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical pr...    30   4.1  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    30   4.1  
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical...    29   5.4  

>Z93393-1|CAB07688.1|  497|Caenorhabditis elegans Hypothetical
           protein Y48E1B.1 protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 88  TXVPVVSLKRVGXPXGXXPPXXXPPPPPP 2
           T V +  +  +  P    PP   PPPPPP
Sbjct: 341 TPVEITEIPPIISPPAPPPPPPPPPPPPP 369


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 106 PAXSILTXVPVVSLKRVGXPXGXXPPXXXPPPPPP 2
           PA    +  P   L  +  P    PP   PPPPPP
Sbjct: 489 PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523


>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
           protein Y51H4A.12 protein.
          Length = 1677

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 68  SKASWXPLXXXPPXXXPPPPPP 3
           S AS  P    PP   PPPPPP
Sbjct: 612 SSASILPQDAAPPHVPPPPPPP 633


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,590,949
Number of Sequences: 27780
Number of extensions: 102355
Number of successful extensions: 3035
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3579019094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)