Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H02
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 36 0.037
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.11
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.11
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.11
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.35
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.35
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 32 0.46
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 32 0.46
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.61
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.61
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.61
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 31 0.81
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 1.9
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 30 2.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 2.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.5
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 30 2.5
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 30 2.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.3
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 4.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.7
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 29 5.7
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 29 5.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 25 7.6
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 9.9
U80451-2|AAB37837.1| 223|Caenorhabditis elegans Hypothetical pr... 28 9.9
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 35.9 bits (79), Expect = 0.037
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXP 767
PPP GP P P P P P P P + PP P
Sbjct: 441 PPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 500
Query: 768 PPPXLXXXFSPPP 806
P P + S PP
Sbjct: 501 PLPPIATPSSVPP 513
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +3
Query: 618 PXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXPPPP 776
P TP P + P P P P P PP PPPP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 518
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXX--PFXXPXXPXLXPXPGXXXYPXTXLQXSPP 761
PPP GG P P G L P P P P P P P + PP
Sbjct: 729 PPPPGGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPPGGCPPPPPPP-PPGGFKGGPP 785
Query: 762 XPPPPXLXXXFSP 800
PPPP + +P
Sbjct: 786 PPPPPGMFAPMAP 798
Score = 33.1 bits (72), Expect = 0.26
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 6/79 (7%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLG----PKXXGXLSPXXPFXXPXXPX--LXPXPGXXXYPXTXLQ 749
PP GG P P G P G L P P P L P G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 750 XSPPXPPPPXLXXXFSPPP 806
PP PPPP PP
Sbjct: 767 GCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +3
Query: 591 PPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXPP 770
PP G P L P G P P P P P P PP PP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP---PPGGCPPPPPPPP 776
Query: 771 PPXLXXXFSPPP 806
P PPP
Sbjct: 777 PGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = +2
Query: 590 PPXGRGXXXPXXNPPLGPQXRWXPFPXFXXXXTQXPKXGPXXRGXXLPXXXXPKXPPFXP 769
PP G P PP+ P P T P P G P P PP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPP 765
Query: 770 PPXPXXXLFPPPXG 811
P PPP G
Sbjct: 766 GGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXX--PFXXPXXPXLXPXPGXXXYPXTXLQXSPP 761
PPP GG P P G L P P P P P P P + PP
Sbjct: 729 PPPPGGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPPGGCPPPPPPP-PPGGFKGGPP 785
Query: 762 XPPPPXLXXXFSP 800
PPPP + +P
Sbjct: 786 PPPPPGMFAPMAP 798
Score = 33.1 bits (72), Expect = 0.26
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 6/79 (7%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLG----PKXXGXLSPXXPFXXPXXPX--LXPXPGXXXYPXTXLQ 749
PP GG P P G P G L P P P L P G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Query: 750 XSPPXPPPPXLXXXFSPPP 806
PP PPPP PP
Sbjct: 767 GCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +3
Query: 591 PPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXPP 770
PP G P L P G P P P P P P PP PP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP---PPGGCPPPPPPPP 776
Query: 771 PPXLXXXFSPPP 806
P PPP
Sbjct: 777 PGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = +2
Query: 590 PPXGRGXXXPXXNPPLGPQXRWXPFPXFXXXXTQXPKXGPXXRGXXLPXXXXPKXPPFXP 769
PP G P PP+ P P T P P G P P PP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPP 765
Query: 770 PPXPXXXLFPPPXG 811
P PPP G
Sbjct: 766 GGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXX--PFXXPXXPXLXPXPGXXXYPXTXLQXSPP 761
PPP GG P P G L P P P P P P P + PP
Sbjct: 312 PPPPGGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPPGGCPPPPPPP-PPGGFKGGPP 368
Query: 762 XPPPPXLXXXFSP 800
PPPP + +P
Sbjct: 369 PPPPPGMFAPMAP 381
Score = 33.1 bits (72), Expect = 0.26
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 6/79 (7%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLG----PKXXGXLSPXXPFXXPXXPX--LXPXPGXXXYPXTXLQ 749
PP GG P P G P G L P P P L P G P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Query: 750 XSPPXPPPPXLXXXFSPPP 806
PP PPPP PP
Sbjct: 350 GCPPPPPPPPPGGFKGGPP 368
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +3
Query: 591 PPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXPP 770
PP G P L P G P P P P P P PP PP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP---PPGGCPPPPPPPP 359
Query: 771 PPXLXXXFSPPP 806
P PPP
Sbjct: 360 PGGFKGGPPPPP 371
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = +2
Query: 590 PPXGRGXXXPXXNPPLGPQXRWXPFPXFXXXXTQXPKXGPXXRGXXLPXXXXPKXPPFXP 769
PP G P PP+ P P T P P G P P PP P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPP 348
Query: 770 PPXPXXXLFPPPXG 811
P PPP G
Sbjct: 349 GGCPPPPPPPPPGG 362
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/73 (26%), Positives = 21/73 (28%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXP 767
PPP G P P P P P P P + PP P
Sbjct: 434 PPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 493
Query: 768 PPPXLXXXFSPPP 806
P P + S PP
Sbjct: 494 PLPPIATPSSVPP 506
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +3
Query: 618 PXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPP-XPPPPXLXXXF 794
P TP P + P P P P P PP PPPP L
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQEI 518
Query: 795 SPPP 806
S PP
Sbjct: 519 SGPP 522
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.35
Identities = 25/92 (27%), Positives = 26/92 (28%)
Frame = +2
Query: 530 PXXXSKXPX*XGXPXXXXXXPPXGRGXXXPXXNPPLGPQXRWXPFPXFXXXXTQXPKXGP 709
P P G P PP G G P PP+G P P F P
Sbjct: 700 PMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPP 759
Query: 710 XXRGXXLPXXXXPKXPPFXPPPXPXXXLFPPP 805
RG F PPP PPP
Sbjct: 760 FGRGAG-------PMSSFPPPPRGGMHHMPPP 784
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.46
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -3
Query: 801 GGKXXXXGXGGGXKGGXFGXXXXGXXXPRXXGPXLGXWVXXXXXKGKGXXRXWGPXGGXX 622
GG G GGG +GG +G G + G G W +G G WG GG
Sbjct: 198 GGPGAYGGPGGGGQGG-YGGGNYGGGWGQQGGGGQGGWGGPQQQQGGG---GWGQQGGGG 253
Query: 621 XG 616
G
Sbjct: 254 QG 255
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 32.3 bits (70), Expect = 0.46
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = -3
Query: 801 GGKXXXXGXGGGXKGGXFGXXXXGXXXPRXXGPXLGXWVXXXXXKGKGXXRXWGPXGGXX 622
GG G GGG +GG +G G + G G W +G G WG GG
Sbjct: 236 GGPGAYGGPGGGGQGG-YGGGNYGGGWGQQGGGGQGGWGGPQQQQGGG---GWGQQGGGG 291
Query: 621 XG 616
G
Sbjct: 292 QG 293
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXP 767
PPP G +P P P P P P P SPP P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 768 PPP 776
PPP
Sbjct: 301 PPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXP 767
PPP G +P P P P P P P SPP P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 768 PPP 776
PPP
Sbjct: 322 PPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXP 767
PPP G +P P P P P P P SPP P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 768 PPP 776
PPP
Sbjct: 307 PPP 309
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +3
Query: 666 PXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXPPPPXLXXXFSPPPXG 812
P P P PG YP SPP PP S PP G
Sbjct: 1041 PPRPMPPQQSPFFNNAPGNGFYPPQPRDFSPPQPPQQSRMFPPSQPPFG 1089
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 642 PKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXPPPPXLXXXFSPP 803
P G + P P P P G P PP PPP L PP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 719 GXXLPXXXXPKXPPFXPPPXPXXXLFPPPXGP 814
G P PK F PPP P + PPP GP
Sbjct: 50 GILPPGQSIPKPSFFIPPPVPNGFI-PPPPGP 80
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +3
Query: 678 FXXPXXPX--LXPXPGXXXYPXTXLQXSPPXPPPPXLXXXFSPPP 806
F P P + P PG P + PPPP + PPP
Sbjct: 64 FIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/114 (25%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +2
Query: 476 PFPPKXPXXGXFXXXKXYPXXXSKXPX*XGXPXXXXXXPPXGRGXXXPXXNPPLGPQXRW 655
P PP P G + P + P G P PP G PP P
Sbjct: 285 PRPPPPPSSGMWPPPP--PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 342
Query: 656 XPFPXFXXXXTQXPKXGPXXRGXXLPXXXXPKXPPFXPPPXPXXX-LFPPPXGP 814
P + P GP P PP PP P + PPP P
Sbjct: 343 YPGGMPPPPPPRYPSAGPGM---------YPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +3
Query: 666 PXXPFXXPXXPXLXPXPGXXXYPXTXLQXS--PPXPPPP 776
P P P P + P PG P PP PPPP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/73 (26%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = +3
Query: 591 PPXGGXXXXPXXTPXLGP-KXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXP 767
PP G P P G P P P + P P + + PP P
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 768 PPPXLXXXFSPPP 806
PP PPP
Sbjct: 338 PPGMRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/114 (25%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Frame = +2
Query: 476 PFPPKXPXXGXFXXXKXYPXXXSKXPX*XGXPXXXXXXPPXGRGXXXPXXNPPLGPQXRW 655
P PP P G + P + P G P PP G PP P
Sbjct: 295 PRPPPPPSSGMWPPPP--PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 352
Query: 656 XPFPXFXXXXTQXPKXGPXXRGXXLPXXXXPKXPPFXPPPXPXXX-LFPPPXGP 814
P + P GP P PP PP P + PPP P
Sbjct: 353 YPGGMPPPPPPRYPSAGPGM---------YPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +3
Query: 666 PXXPFXXPXXPXLXPXPGXXXYPXTXLQXS--PPXPPPP 776
P P P P + P PG P PP PPPP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/73 (26%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = +3
Query: 591 PPXGGXXXXPXXTPXLGP-KXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXP 767
PP G P P G P P P + P P + + PP P
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 768 PPPXLXXXFSPPP 806
PP PPP
Sbjct: 348 PPGMRYPGGMPPP 360
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/79 (31%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Frame = -3
Query: 813 GPXGGGKXXXXGXGGGXK----GGXFGXXXXGXXXPRXXGPXLGXWVXXXXXKGKGXXRX 646
G GGG G GGG GG FG G G G G G
Sbjct: 163 GGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGG 222
Query: 645 WGPXGGXXXGXXXPLPXGG 589
+GP GG G P GG
Sbjct: 223 YGPSGGYGGGYG---PGGG 238
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/66 (30%), Positives = 23/66 (34%)
Frame = -3
Query: 813 GPXGGGKXXXXGXGGGXKGGXFGXXXXGXXXPRXXGPXLGXWVXXXXXKGKGXXRXWGPX 634
G GGG GGG GG +G G GP G + G G +G
Sbjct: 108 GMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGP--GGYGMGGYGGGGGGGGDFGGY 165
Query: 633 GGXXXG 616
GG G
Sbjct: 166 GGGGMG 171
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = -3
Query: 801 GGKXXXXGXGGGXKGGXFGXXXXGXXXPRXXGPXLGXWVXXXXXKGKGXXRXWGPXGGXX 622
GG G GGG +GG G G + G G W +G G WG GG
Sbjct: 236 GGPGAYGGPGGGGQGGYGGDYGGGWG--QQGGGGQGGWGGPQQQQGGG---GWGQQGGGG 290
Query: 621 XG 616
G
Sbjct: 291 QG 292
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +2
Query: 590 PPXGRGXXXPXXNPPLGPQXRWXPFPXFXXXXTQXPKXGPXXRGXXLPXXXXPKXPPFXP 769
PP G P GP + P P T P G P + PP
Sbjct: 78 PPGPSGPSGPPVYHNQGPPRGYPPPPP-QGADTWRGAPPPAHHGHFGPPGHHFQGPPQHF 136
Query: 770 PPXPXXXLFPPPXGP 814
PP P FP P GP
Sbjct: 137 PPGPPRPHFPGPPGP 151
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/82 (28%), Positives = 26/82 (31%)
Frame = +3
Query: 531 RXXFQXSPXNXGXRXXXXXPPPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXP 710
R Q S + G PPP P P P G ++P P P L P
Sbjct: 183 RRASQSSSTSAGSSIPHAPPPPVPLTSNIPQ-APPAPPPPIGGIAPVNAHGAPPPPPLPP 241
Query: 711 XPGXXXYPXTXLQXSPPXPPPP 776
P PP PPPP
Sbjct: 242 VGAGAPPP-------PPPPPPP 256
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = -3
Query: 801 GGKXXXXGXGGGXKGGXFGXXXXGXXXPRXXGPXLGXWVXXXXXKGKGXXRXWGPXGGXX 622
GG G GGG +GG G G + G G W +G G WG GG
Sbjct: 198 GGPGAYGGPGGGGQGGYGGDYGGGWG--QQGGGGQGGWGGPQQQQGGG---GWGQQGGGG 252
Query: 621 XG 616
G
Sbjct: 253 QG 254
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/62 (32%), Positives = 23/62 (37%)
Frame = -3
Query: 801 GGKXXXXGXGGGXKGGXFGXXXXGXXXPRXXGPXLGXWVXXXXXKGKGXXRXWGPXGGXX 622
GG G GGG +GG G G + G G W +G G WG GG
Sbjct: 236 GGPGAYGGPGGGGQGGYGGDYGGGWG--QQGGGGQGGWGGPQQQQGGG---GWGQQGGGG 290
Query: 621 XG 616
G
Sbjct: 291 QG 292
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/82 (28%), Positives = 26/82 (31%)
Frame = +3
Query: 531 RXXFQXSPXNXGXRXXXXXPPPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXP 710
R Q S + G PPP P P P G ++P P P L P
Sbjct: 169 RRASQSSSTSAGSSIPHAPPPPVPLTSNIPQ-APPAPPPPIGGIAPVNAHGAPPPPPLPP 227
Query: 711 XPGXXXYPXTXLQXSPPXPPPP 776
P PP PPPP
Sbjct: 228 VGAGAPPP-------PPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/82 (28%), Positives = 26/82 (31%)
Frame = +3
Query: 531 RXXFQXSPXNXGXRXXXXXPPPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXP 710
R Q S + G PPP P P P G ++P P P L P
Sbjct: 169 RRASQSSSTSAGSSIPHAPPPPVPLTSNIPQ-APPAPPPPIGGIAPVNAHGAPPPPPLPP 227
Query: 711 XPGXXXYPXTXLQXSPPXPPPP 776
P PP PPPP
Sbjct: 228 VGAGAPPP-------PPPPPPP 242
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 708 PXPGXXXYPXTXLQXSPPXPPPPXLXXXFSPPP 806
P P + LQ +PP PPPP +PPP
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPP 100
Score = 25.0 bits (52), Expect(2) = 8.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 756 PPXPPPPXLXXXFSPPP 806
PP PPPP PPP
Sbjct: 86 PPPPPPPPTLKAPPPPP 102
Score = 21.4 bits (43), Expect(2) = 8.0
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +3
Query: 744 LQXSPPXPPPP 776
++ +PP PPPP
Sbjct: 63 VKATPPPPPPP 73
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 696 PXLXPXPGXXXYPXTXLQXSPPXPPPPXLXXXFSPPPXG 812
P P P +P + P PPPP + P P G
Sbjct: 110 PMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSG 148
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +3
Query: 696 PXLXPXPGXXXYPXTXLQXSPPXPPPPXLXXXFSPPPXG 812
P P P +P + P PPPP + P P G
Sbjct: 110 PMPTPMPFPQHFPFPGMPPMPSGPPPPSMAYGMPPMPSG 148
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 29.1 bits (62), Expect = 4.3
Identities = 29/113 (25%), Positives = 32/113 (28%)
Frame = +2
Query: 467 KXXPFPPKXPXXGXFXXXKXYPXXXSKXPX*XGXPXXXXXXPPXGRGXXXPXXNPPLGPQ 646
K PFP P K P K P P + P P L P+
Sbjct: 27 KSEPFPSPMPFPKPMPKPKPKPKPMPKHKP-KPFPKPMLFPKPMPKHKPKPFPKPMLFPK 85
Query: 647 XRWXPFPXFXXXXTQXPKXGPXXRGXXLPXXXXPKXPPFXPPPXPXXXLFPPP 805
PFP PK P +P P P P P LFP P
Sbjct: 86 PM--PFPK--PMPKSKPKSEPFPN--PMPFPKPKPMPKHKPKPFPKPMLFPKP 132
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/71 (26%), Positives = 23/71 (32%)
Frame = +2
Query: 593 PXGRGXXXPXXNPPLGPQXRWXPFPXFXXXXTQXPKXGPXXRGXXLPXXXXPKXPPFXPP 772
P + P P P+ + PFP PK P + P P P
Sbjct: 172 PFPKPMPKPKPKPKPMPKHKPKPFPK----PMLFPKPMPIPKPMPFPKPMPKPMPKHKPK 227
Query: 773 PXPXXXLFPPP 805
P P LFP P
Sbjct: 228 PFPKPMLFPKP 238
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXX-PFXXPXXPXLXPXPGXXXYPXTXLQXSPPX 764
PPP G P P+ +P P P P P P + PP
Sbjct: 577 PPPSSGTRGIAPSRPL--PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPP 634
Query: 765 PPPP 776
PPPP
Sbjct: 635 PPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXX-PFXXPXXPXLXPXPGXXXYPXTXLQXSPPX 764
PPP G P P+ +P P P P P P + PP
Sbjct: 403 PPPSSGTRGIAPSRPL--PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPP 460
Query: 765 PPPP 776
PPPP
Sbjct: 461 PPPP 464
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 758 PFXPPPXPXXXLFPPPXGP 814
PF PPP P + PPP P
Sbjct: 404 PFLPPPPPHQLVMPPPAMP 422
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 758 PFXPPPXPXXXLFPPPXGP 814
PF PPP P + PPP P
Sbjct: 404 PFLPPPPPHQLVMPPPAMP 422
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 708 PXPGXXXYPXTXLQXSPPXPPPPXLXXXFSPPP 806
P P P PP PPPP + PPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +3
Query: 588 PPPXGGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXP 767
PPP P L P P P L P P L PP P
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPP-PPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
Query: 768 PPP 776
PPP
Sbjct: 594 PPP 596
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +3
Query: 600 GGXXXXPXXTPXLGPKXXGXLSPXXPFXXPXXPXLXPXPGXXXYPXTXLQXSPPXPPPPX 779
GG P TP P+ P P P P P P P PPPP
Sbjct: 25 GGCGGCP--TPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPIC----PPPPPPP 78
Query: 780 LXXXFSPPP 806
+ PPP
Sbjct: 79 MPCPPPPPP 87
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.0 bits (52), Expect(2) = 7.6
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 696 PXLXPXPGXXXYPXTXLQXSPPXPPPP 776
P P P P L PP PPPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPP 1362
Score = 21.4 bits (43), Expect(2) = 7.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +3
Query: 759 PXPPPPXLXXXFSPPPXGXXL 821
P PPPP S P G L
Sbjct: 1354 PVPPPPPPPPTMSKAPTGVPL 1374
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = -3
Query: 813 GPXGGGKXXXXGXGGGXKGGXFGXXXXGXXXPRXXGPXLGXWVXXXXXKGKGXXRXWGPX 634
G GGG+ G GG +GG G G G G G G
Sbjct: 50 GGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGSQ 109
Query: 633 GGXXXG 616
GG G
Sbjct: 110 GGSQGG 115
>U80451-2|AAB37837.1| 223|Caenorhabditis elegans Hypothetical
protein F11G11.5 protein.
Length = 223
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 9/47 (19%)
Frame = +3
Query: 663 SPXXPFXXPXXPXLXPXPGXXXYPXTXLQXS---------PPXPPPP 776
+P P P P P P YP T +Q S P PPPP
Sbjct: 31 APSAPEQQPTSPSRPPPPAGFVYPSTDIQNSSEVHVSAPVPAGPPPP 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,984,289
Number of Sequences: 27780
Number of extensions: 159516
Number of successful extensions: 1771
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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