Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_H01
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 44 2e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 44 3e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 8e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 38 0.002
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.006
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.010
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.013
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.071
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.16
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.22
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 30 0.50
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.50
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 0.66
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.5
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 2.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.5
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 26 6.1
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 26 6.1
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 26 6.1
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 26 8.1
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 523 PPPXPRXXXPPRXSPH--PPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P+ PP+ S PP P S PP P PP GP + PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/43 (44%), Positives = 19/43 (44%)
Frame = +1
Query: 517 TPPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXP 645
TPPPP PP P P P S PP PP P P P P
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPP-PPL-PASSAPSVPNP 1746
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTP 639
PP PP P P S PP P PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXP 645
P P PP P PP P PP PP P + P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXT 636
P PP P PP P+ P P P PP P T
Sbjct: 1476 PAPPAPVSQLPPAV-PNVPVPSMIPSVAQQPPSSVAPAT 1513
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 4/46 (8%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPP----XPPPXXGPXTPXPPP 651
P P P R P S P PP PPP P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 44.0 bits (99), Expect = 3e-05
Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +1
Query: 517 TPPPPXPRXXXP-PRXSP---HPPXPXSXPPXPPXPPP---XXGPXTPXPPP 651
+PPPP P P P +P PP P P PP PPP GP P PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +1
Query: 523 PPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPP 618
PPP P PP P P + PP PP PPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 743 PPPXXXXXPPPPPPP 787
PP PPPPPPP
Sbjct: 753 PPAPIMGGPPPPPPP 767
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 743 PPPXXXXXPPPPPPP 787
P P PPPPPPP
Sbjct: 754 PAPIMGGPPPPPPPP 768
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 743 PPPXXXXXPPPPPPP 787
PPP PPPPPP
Sbjct: 752 PPPAPIMGGPPPPPP 766
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 743 PPPXXXXXPPPPPPP 787
PPP PPPPPP
Sbjct: 766 PPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 743 PPPXXXXXPPPPPPP 787
PP PPPPPPP
Sbjct: 767 PPGVAGAGPPPPPPP 781
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.1 bits (87), Expect = 8e-04
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPH---PPXPXSXPPXPPXPPPXXGPXTPXP 645
PP P P PP +P PP P PP PPP P P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPH--PPXPXSXPPXPPXPPPXXGPXTPXP 645
PP P P PP P PP P PP PPP P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPH--PPXPXSXPPXPPXPPPXXGPXTPXP 645
PP P P PP +P PP P PP P P P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPP--XPPXPPPXXGPXTPXPPP 651
PP P P PP P P PP PP P P G P PPP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG-VPPVPPP 1213
Score = 35.5 bits (78), Expect = 0.010
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPH--PPXPXSXPPXPPXPPPXXGPXTPXP 645
PP P P PP P PP P PP P P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPH--PPXPXSXPPXPPXPPPXXG-PXTPXP 645
PP P P PP +P PP P PP P P G P P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 33.1 bits (72), Expect = 0.054
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +1
Query: 520 PPPPXPRXXXP-PRXS-PHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P P P+ S PP P PP P P G P PPP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG-VPPVPPP 1194
Score = 32.7 bits (71), Expect = 0.071
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 520 PPPPXPRXXXP-PRXSPHPPXPXSXPPXPPXPPPXXGPXTPXP 645
PP P P P P + PP P S P PPP P + P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Score = 32.7 bits (71), Expect = 0.071
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 520 PPPPXPRXXXP-PRXS-PHPPXPXSXPPXPPXPPPXXGPXTPXP 645
PP P P P P+ S PP P PP P P P P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPH--PPXPXSXPPXPPXP-PPXXGPXTPXP 645
PP P P PP P PP P PP P P P P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +1
Query: 517 TPPPPXPRXXXPPRXSPH-PPXPXSXPPXPPXPPPXXGPXTPXP 645
+P P R P+ S PP P PP P P P P P
Sbjct: 1003 SPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIP 1046
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXP-PXPPXPPPXXG-PXTPXPPP 651
PP P P PP P P P PP P G P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 523 PPPXPRXXXPPRXSPHPPXPXSXPP--XPPXPPPXXG-PXTPXP 645
PP P PP P P PP PP P P G P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPP 648
PP P P PP P P P P PP P PP
Sbjct: 1092 PPVPKPSVAAPP--VPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 29.1 bits (62), Expect = 0.87
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 517 TPPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXP 645
T PP P+ +P PP P P P P P P P
Sbjct: 1047 TSTPPVPKSSSGAPSAP-PPVPAPSSEIPSIPAPSGAPPVPAP 1088
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Frame = +1
Query: 520 PPPPXPRXXXP----PRXSPHPPXPXSXPPXPP---XPPPXXGPXTPXPP 648
PP P P P P +P P P PP P PP P PP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP 1113
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Frame = +1
Query: 520 PPPPXPRXXXP-PRXS---PHPPXPXSXPPXPP---XPPPXXGPXTPXPP 648
PP P P P P+ S P P P PP P PP P + PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/44 (43%), Positives = 19/44 (43%)
Frame = -2
Query: 650 GGGXGVXGPXXGGGWGGXGGXXXGXGGXGEXRGGXXXRGXGGGG 519
GG G G G GG GG G GG G RGG G GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 35.1 bits (77), Expect = 0.013
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -2
Query: 617 GGGWGGXGGXXXGXGGXGEXRGGXXXRGXGG 525
GG GG GG G GG G RGG G GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -3
Query: 649 GGXEGXGDRXGGGXGGGXGVGXXGXVGXAKXVGGXXHGXXGGVVXXRXXTRG 494
GG G GGG GG G G G G GG G GG R +G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG-ARGGRGGSSGGRGGAKG 69
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -2
Query: 647 GGXGVXGPXXGGGWGGXGGXXXGXGGX-GEXRGGXXXRGXGGGG 519
GG G GG GG GG G GG G RGG G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 29.1 bits (62), Expect = 0.87
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 650 GGGXGVXGPXXGGGWGGXGGXXXGXGGXGEXRGG 549
GGG G GG G GG GG G +GG
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 605 GGXGGXXXGXGGXGEXRGGXXXRGXGGGG 519
G GG GG G GG G G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGG 34
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +1
Query: 520 PPPPX----PRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P PPR S PP P S PP P PP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 517 TPPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
T PP P PP + PP P PP P PP P P P
Sbjct: 141 TSAPPRPSIP-PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 523 PPPXPRXXXPPRXSPHPPXPXS-XPPXPPXPPPXXGPXTPXPP 648
PPP P PP S PP P S PP P P P P P
Sbjct: 150 PPPSPASA-PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 535 PRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXP 645
P PP P S PP P PPP P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 29.9 bits (64), Expect = 0.50
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P PP P P PP P P P P PP
Sbjct: 165 PPIPSSLPPP---AQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 29.1 bits (62), Expect = 0.87
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 303 PAFPKSPSSFCPKVPKTXPPPICLSQVTSRGCR 205
P+ P PS+ P PK PPP+ + V + R
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSR 217
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +1
Query: 526 PPXPRXXXP-PRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPP 648
PP P P P P P P + PP P P PP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 595 PXPPXPPPXXGPXTPXPPP 651
P PP PPP P P P
Sbjct: 3 PAPPPPPPAPAPAAAAPAP 21
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.5 bits (78), Expect = 0.010
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 650 GGGXGVXGPXXG-GGWGGXGGXXXGXGGXGEXRGGXXXRGXGGGG 519
G G G GP G GG+GG G G GG G GG G G GG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFG----GFGGEGHHHGGHGGFGGGPGG 232
Score = 34.7 bits (76), Expect = 0.018
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -2
Query: 650 GGGXGVXGPXXGG--GWGGXGGXXXGXGGXGEXRGGXXXRGXGGGG 519
GGG G P GG G+GG GG GG G GG G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Score = 34.3 bits (75), Expect = 0.023
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -2
Query: 647 GGXGVXGPXXGGGWGGXGGXXXGXGGXGEXRGGXXXR--GXGGG 522
GG G G GG GG GG G GG G GG G GGG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 647 GGXGVXGPXXGGGWGGXGGXXXGXGGXGEXRGG 549
GG G GGG GG GG G GG GG
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -3
Query: 649 GGXEGXGDRXGGGXGG-GXGVGXXGXVGXAKXVGGXXHGXXG 527
GG EG GGG GG G G+G G G HG G
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -2
Query: 617 GGGWGGXGGXXXGXGGXGEXRGGXXXRGXGGG 522
GGG+GG GG G GG GG G GG
Sbjct: 187 GGGFGGFGG---GSGGPPPGPGGFGGFGGFGG 215
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.013
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PPPP P P PP S PP PPP P T PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRS---APPPPPPRSAPSTGRQPP 377
Score = 34.3 bits (75), Expect = 0.023
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 12/56 (21%)
Frame = +1
Query: 520 PPPPXPRXXX------PP--RXSPHPPXPXSXPPXPPXPPPXXGPXT----PXPPP 651
PPPP PR PP R +P PP P S P PPP P PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 33.1 bits (72), Expect = 0.054
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPP-XXGPXTPXPPP 651
PPPP PR P P PP PPP G P PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 517 TPPPPXPRXXXPPRXSPHPP-XPXSXPPXPPXPPPXXGPXTPXPPP 651
TPP P P P PP P S P P PP P P PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP-PSAPIAPP 458
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 550 PPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP PP P P PP PP P P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAP-PPAPAP 482
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPP--PXXGPXTPXPPP 651
P P P P PP PP P P P P P PPP
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXP 645
PP P PP + P P PP P PPP P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPP-LPPAAPAPPPAPAPAPAAP 487
Score = 29.5 bits (63), Expect = 0.66
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +1
Query: 517 TPPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXT--PXPPP 651
T PP P P P S P PP PPP G + P PP
Sbjct: 227 TSAPPIP-PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 29.5 bits (63), Expect = 0.66
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 538 RXXXPPRXSPHPPXPXSXPPX-PPXPPPXXGPXTPXPPP 651
R PP +P P P S PP PP PP P PP
Sbjct: 411 RTSTPPVPTP-PSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 6/39 (15%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPP------XPPXPPP 618
PPP PP P P P S P PP PPP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPH--PPXPXSXPPXPPXPPPXXGPXTPXPP 648
P PP PP P P P P PP PP P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP--SAPIAPPLP 460
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 523 PPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
P P P P P + PP PP P P P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP--PPAPAPAP 484
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.071
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 580 PXSXPPXPPXPPPXXGPXTPXPPP 651
P PP PP PP P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 550 PPRXSPHPPXPXSXPPXPPXPPPXXG 627
P P PP P PP P PPP G
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 30.3 bits (65), Expect = 0.38
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXP 582
PPPP P PP P PP P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 571 PPXPXSXPPXPPXPPPXXGPXTPXPP 648
PP PP PP P P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXP 582
PPPP P P P PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.16
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -2
Query: 650 GGGXGVXGPXXGGGWGGXGGXXXGXGGXGEXRGGXXXRGXGG 525
GG G G GG+GG G G G RGG GG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -2
Query: 650 GGGXGVXGPXXGGGWGGXGGXXXGXGGXGEXRGG--XXXRGXGGGG 519
GG G G G GG GG G G G RGG RG GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGG-SRGGSRGGFRGGSRGG 189
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 626 PXXGGGWGGXGGXXXGXGGXGEXRGGXXXRGXGGGG 519
P GGG G G G GG G G RG G GG
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.9 bits (64), Expect = 0.50
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPP----XPXSXPP-XPPXPPPXXGPXTPXPP 648
PPPP P+ PP S P + PP P PP P P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQP 253
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P P PP P PP P PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P P PP P PP P PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P P PP P PP P PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P P PP P PP P PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P P PP P PP P PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P P PP P PP P PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P P PP P PP P PPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 526 PPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPP 651
PP P P P PP P PP P PPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.5 bits (63), Expect = 0.66
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +1
Query: 553 PRXSPHPPXPXSXPPXP--PXPPPXXGPXTPXPPP 651
P+ +P PP P P P PPP +P PP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +1
Query: 517 TPPPPXPRXXXPPRXSPHPPXPXS--XPPXPPXPPPXXGPXTP 639
TP PP P + P PP S P PP P TP
Sbjct: 728 TPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSSTP 770
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXPPPXXQ 660
P PP P PP P P P P P P P Q
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQ 621
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Frame = +1
Query: 526 PPXPRXXXPPRXSP-HPPXPXSXPPXPPXPPPXXGPXTPXP 645
PP P P P PP P P P P P P P
Sbjct: 107 PPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 529 PXPRXXXPPRXSPHPPXPXSXPPXPPXPPP 618
P P P +P P P PP PPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 550 PPRXSPHPPXPXSXPPXPPXP--PPXXGPXTPXPPP 651
PP +P P PP PP P PP + P P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +1
Query: 523 PPPXPRXXXPPRXSPHPPXPXSXPP 597
PP P +P PP P + PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 21.8 bits (44), Expect(2) = 3.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1
Query: 574 PXPXSXPPXPPXPP 615
P P + P PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 520 PPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGPXTPXP 645
PP P PP P S P P P P G T P
Sbjct: 1895 PPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVP 1936
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = +1
Query: 517 TPPPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXG--PXTPXPPP 651
TPPPP SP P S PP P TP PP
Sbjct: 315 TPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPP 361
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -1
Query: 294 PKSPS-SFCPKVPKTXPPPICLSQVTS 217
P SP SF +VP PPP+C V S
Sbjct: 165 PISPDYSFPLRVPINIPPPLCTPSVVS 191
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 523 PPPXPRXXXPPRXSPHPPXPXSXPPXPPXPPPXXGP 630
P P P P PP P PPP GP
Sbjct: 178 PGPLPSGNVPSPAEFQAMMASGFPPFMPIPPPIGGP 213
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 617 GGGWGGXGGXXXGXGGXGEXRGGXXXRGXGGG 522
GGG GG G G + GG R GGG
Sbjct: 136 GGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGG 167
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 595 PXPPXPPPXXGPXTPXPP 648
P PP PP GP PP
Sbjct: 133 PAPPLPPSSEGPAVDIPP 150
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,261,316
Number of Sequences: 5004
Number of extensions: 42556
Number of successful extensions: 544
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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