Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_G19
         (905 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.3  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
 Frame = +3

Query: 186 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQL------- 344
           + L++  V+  Y   + K      +  G  +   + ++ E+G R  + FA +        
Sbjct: 583 KDLFLEAVLLRYPD-LNKIFYVQTDSSGYGLGAELYQIQEDGSRGVIAFASRSLRGPELN 641

Query: 345 WTKDGKEIVKSYFPIQFTVIFTEQTVKLINKRDHHALKLIDQ 470
           +T   KE++   F +    I+ + T K+I + DH ALK + +
Sbjct: 642 YTTTEKELLGVIFALHKFRIYIQVT-KIIIRTDHQALKFLSR 682


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
 Frame = +3

Query: 321 TMDFAYQLWTKDG---KEIVKS--YFPIQFTVIFTEQT 419
           ++D+A + WTK G    +IV    +F   FT+ FT +T
Sbjct: 395 SVDYAVKFWTKKGFPKSKIVLGVPFFGRSFTLQFTNET 432


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 519 CWFCLWSHRMQFCCGFV 469
           C F +++  + FCC F+
Sbjct: 171 CAFIIFTMHLLFCCAFI 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,763
Number of Sequences: 336
Number of extensions: 3309
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)