Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_G19
         (905 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.42 
SB_55418| Best HMM Match : GWT1 (HMM E-Value=1.5)                      30   3.0  
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.0  
SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.0  

>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2870

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 22/60 (36%), Positives = 26/60 (43%)
 Frame = +1

Query: 640  TVSSTXDSXRLDTLQTPPGXXXALPXSXXPTXMVPSXLQPAXLPPXRS*PPPXKIXARPT 819
            TV +T  +    T  TPP    ALP     T + P  L P  LPP    PPP +    PT
Sbjct: 935  TVPTTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPLPP--LPPP---PPPVQTTTAPT 989


>SB_55418| Best HMM Match : GWT1 (HMM E-Value=1.5)
          Length = 260

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 340 W*AKSMVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMT 206
           W +   +F++  SI  + A+L     F F    H+  AV+YS  T
Sbjct: 127 WQSSRFMFIMRLSILSYAAALFHDQGFEFSLGLHILAAVAYSVRT 171


>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1021

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +3

Query: 219 YETAIAKCSEYLKEK--KGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP 386
           Y + I K  E+ KEK  KG+  K    R  E GKR     A     +D  E +K +FP
Sbjct: 261 YPSLIDKLQEHEKEKELKGKRKKSKTSRSPEKGKREEEKDALLKQEEDEIERMKQFFP 318


>SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 975

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 249 YLKEKKGEVIKEAVKRLIENGKRNTMDFAY 338
           + +E+ GE   EA KRLI+ GK+  M   Y
Sbjct: 676 FREEEDGESFAEAKKRLIKQGKQQIMFLLY 705


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,732,177
Number of Sequences: 59808
Number of extensions: 425919
Number of successful extensions: 1231
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2609867019
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)